Detailed information NTG0041338

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ECABU_RS22395
• Genome accession: NC_017631
• Coordinates: 4511983..4513008 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli ABU 83972
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4506983..4518008

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ECABU_RS22365 (ECABU_c44340)	zapB	4507067..4507312 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
ECABU_RS22370 (ECABU_c44350)	rraA	4507397..4507882 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ECABU_RS22375 (ECABU_c44360)	menA	4507975..4508901 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ECABU_RS22380 (ECABU_c44370)	hslU	4508968..4510299 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
ECABU_RS22385 (ECABU_c44380)	hslV	4510309..4510839 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ECABU_RS22390 (ECABU_c44390)	ftsN	4510932..4511891 (-)	960	WP_000068846.1	cell division protein FtsN	-
ECABU_RS22395 (ECABU_c44400)	cytR	4511983..4513008 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ECABU_RS22400 (ECABU_c44410)	priA	4513164..4515362 (-)	2199	WP_001305041.1	primosomal protein N'	Machinery gene
ECABU_RS22405 (ECABU_c44420)	rpmE	4515565..4515777 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
ECABU_RS22410 (ECABU_c44440)	yiiX	4515838..4516446 (-)	609	WP_000702296.1	YiiX family permuted papain-like enzyme	-
ECABU_RS22415 (ECABU_c44450)	metJ	4516506..4516823 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=41338 ECABU_RS22395 WP_000644904.1 4511983..4513008(-) (cytR) [Escherichia coli ABU 83972]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=41338 ECABU_RS22395 WP_000644904.1 4511983..4513008(-) (cytR) [Escherichia coli ABU 83972]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACTATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACAGTTCATATAGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGTTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628