Detailed information    

insolico Bioinformatically predicted

Overview

Name   stkP/pknB   Type   Regulator
Locus tag   FHE72_RS24465 Genome accession   NZ_CP047394
Coordinates   1853326..1853985 (+) Length   219 a.a.
NCBI ID   WP_350448836.1    Uniprot ID   -
Organism   Rossellomorea vietnamensis strain 151-6     
Function   activate comX expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 1848326..1858985
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FHE72_RS09555 (FHE72_09555) def 1849671..1850153 (+) 483 WP_159361855.1 peptide deformylase -
  FHE72_RS09560 (FHE72_09560) fmt 1850153..1851103 (+) 951 WP_159361856.1 methionyl-tRNA formyltransferase -
  FHE72_RS09565 (FHE72_09565) rsmB 1851096..1852433 (+) 1338 WP_159361857.1 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB -
  FHE72_RS09570 (FHE72_09570) - 1852572..1853321 (+) 750 WP_034755754.1 Stp1/IreP family PP2C-type Ser/Thr phosphatase -
  FHE72_RS24465 stkP/pknB 1853326..1853985 (+) 660 WP_350448836.1 protein kinase Regulator
  FHE72_RS09575 (FHE72_09575) - 1854012..1855322 (+) 1311 WP_350448837.1 PASTA domain-containing protein -
  FHE72_RS09580 (FHE72_09580) rsgA 1855472..1856353 (+) 882 WP_159361858.1 ribosome small subunit-dependent GTPase A -
  FHE72_RS09585 (FHE72_09585) rpe 1856356..1857006 (+) 651 WP_159361859.1 ribulose-phosphate 3-epimerase -
  FHE72_RS09590 (FHE72_09590) - 1857064..1857722 (+) 659 Protein_1876 thiamine diphosphokinase -
  FHE72_RS09595 (FHE72_09595) spoVM 1857824..1857904 (+) 81 WP_032088878.1 stage V sporulation protein SpoVM -
  FHE72_RS09600 (FHE72_09600) rpmB 1858623..1858811 (+) 189 WP_034755741.1 50S ribosomal protein L28 -

Sequence

Protein


Download         Length: 219 a.a.        Molecular weight: 24659.48 Da        Isoelectric Point: 7.0389

>NTDB_id=413283 FHE72_RS24465 WP_350448836.1 1853326..1853985(+) (stkP/pknB) [Rossellomorea vietnamensis strain 151-6]
MMEGKRISGRYRIIKLIGGGGMANVYLAHDVILDREVAIKMLRIDFANEEEFIKRFQREAQSATSLAHPNIVSIYDVGEE
DDLYYIVMEYVHGMTLKQYIQQHSPVNVDKAIDIMKQLTIAMSHAHQNHIVHRDIKPHNILLDEEGNVKITDFGIAMALS
ATSITQTNSVLGSVHYLSPEQARGGMATKKSDIYSLGIVMFELLTGRLPFSGSRLFRLP

Nucleotide


Download         Length: 660 bp        

>NTDB_id=413283 FHE72_RS24465 WP_350448836.1 1853326..1853985(+) (stkP/pknB) [Rossellomorea vietnamensis strain 151-6]
ATGATGGAAGGTAAGCGCATCAGTGGGCGTTACAGAATTATTAAACTCATTGGTGGAGGGGGAATGGCCAACGTTTATTT
AGCTCACGATGTGATTCTCGATCGTGAAGTGGCCATTAAAATGCTCCGCATCGACTTTGCCAATGAAGAGGAATTCATTA
AACGATTCCAACGGGAAGCCCAATCTGCTACTAGTCTTGCCCACCCTAATATTGTGAGCATTTATGATGTAGGAGAAGAG
GATGATCTCTATTATATCGTCATGGAATATGTGCATGGCATGACGCTAAAGCAATACATACAGCAACACTCGCCTGTCAA
TGTCGACAAGGCGATCGATATCATGAAGCAACTGACAATCGCCATGTCTCATGCACATCAGAATCATATCGTGCACCGGG
ACATCAAGCCTCATAATATCCTTCTTGATGAAGAAGGAAATGTGAAGATAACCGATTTCGGAATCGCGATGGCCCTCAGT
GCCACCTCGATCACACAGACCAATTCGGTTCTCGGATCGGTACACTATCTTTCTCCTGAGCAGGCGAGAGGCGGGATGGC
CACAAAGAAATCGGACATCTATTCTCTCGGGATCGTCATGTTCGAATTGTTGACGGGCAGATTACCTTTCTCGGGGAGTC
GGCTGTTTCGATTGCCTTAA

Domains

Predicted by InterproScan.

Protein kinase domain (Pkinase)

(11-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  stkP/pknB Streptococcus salivarius strain HSISS4

57.619

95.89

0.553
  pknB Streptococcus mutans UA159

57.619

95.89

0.553
  stkP Streptococcus pneumoniae TIGR4

57.143

95.89

0.548
  stkP Streptococcus pneumoniae D39

57.143

95.89

0.548
  stkP Streptococcus pneumoniae R6

57.143

95.89

0.548
  stkP Streptococcus pneumoniae Rx1

56.667

95.89

0.543

Multiple sequence alignment