Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | GO994_RS04280 | Genome accession | NZ_CP047376 |
| Coordinates | 839822..840142 (-) | Length | 106 a.a. |
| NCBI ID | WP_005318073.1 | Uniprot ID | A4SJ96 |
| Organism | Aeromonas salmonicida subsp. salmonicida strain J410 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 834822..845142
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GO994_RS04260 (GO994_04260) | - | 835106..835804 (-) | 699 | WP_005318084.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| GO994_RS04265 (GO994_04265) | - | 836158..837129 (+) | 972 | WP_011898383.1 | response regulator | - |
| GO994_RS04270 (GO994_04270) | - | 837205..838602 (-) | 1398 | WP_017412884.1 | peptide MFS transporter | - |
| GO994_RS04275 (GO994_04275) | galU | 838816..839727 (-) | 912 | WP_159364359.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| GO994_RS04280 (GO994_04280) | comEA | 839822..840142 (-) | 321 | WP_005318073.1 | ComEA family DNA-binding protein | Machinery gene |
| GO994_RS04285 (GO994_04285) | cysQ | 840310..841080 (+) | 771 | WP_005318069.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| GO994_RS04290 (GO994_04290) | - | 841162..841458 (-) | 297 | WP_005318066.1 | YciI family protein | - |
| GO994_RS04295 (GO994_04295) | - | 841485..842036 (-) | 552 | WP_005318063.1 | septation protein A | - |
| GO994_RS04300 (GO994_04300) | - | 842122..843657 (-) | 1536 | WP_034283547.1 | pyridoxal-dependent decarboxylase | - |
| GO994_RS04305 (GO994_04305) | - | 843882..844517 (+) | 636 | WP_017412882.1 | PAQR family membrane homeostasis protein TrhA | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11222.15 Da Isoelectric Point: 10.0215
>NTDB_id=413095 GO994_RS04280 WP_005318073.1 839822..840142(-) (comEA) [Aeromonas salmonicida subsp. salmonicida strain J410]
MNYKILTATLLLSCLPLLSQPLLAADKPAAKPATTVTTAKESGKVNLNTASINELTALKGIGEKKAQAIVDFRQKQGKFT
TVEQLADVSGIGPATLEANRDMIIVK
MNYKILTATLLLSCLPLLSQPLLAADKPAAKPATTVTTAKESGKVNLNTASINELTALKGIGEKKAQAIVDFRQKQGKFT
TVEQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=413095 GO994_RS04280 WP_005318073.1 839822..840142(-) (comEA) [Aeromonas salmonicida subsp. salmonicida strain J410]
ATGAACTACAAAATCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGCTCAGCCAGCCTTTGCTGGCCGCCGACAA
GCCGGCTGCCAAGCCAGCGACCACGGTCACCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACGGCCAGTATCAATG
AGTTAACTGCCCTCAAGGGGATCGGAGAGAAGAAGGCGCAGGCCATCGTCGATTTTCGTCAGAAACAGGGCAAGTTCACC
ACGGTTGAACAACTGGCGGATGTCAGCGGCATAGGGCCGGCCACTCTGGAAGCAAATCGGGACATGATCATCGTCAAATA
G
ATGAACTACAAAATCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGCTCAGCCAGCCTTTGCTGGCCGCCGACAA
GCCGGCTGCCAAGCCAGCGACCACGGTCACCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACGGCCAGTATCAATG
AGTTAACTGCCCTCAAGGGGATCGGAGAGAAGAAGGCGCAGGCCATCGTCGATTTTCGTCAGAAACAGGGCAAGTTCACC
ACGGTTGAACAACTGGCGGATGTCAGCGGCATAGGGCCGGCCACTCTGGAAGCAAATCGGGACATGATCATCGTCAAATA
G
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
50 |
100 |
0.519 |
| comEA | Vibrio cholerae strain A1552 |
50 |
100 |
0.519 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
46.392 |
91.509 |
0.425 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
42.453 |
100 |
0.425 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
61.905 |
59.434 |
0.368 |