Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | GO992_RS17535 | Genome accession | NZ_CP047374 |
| Coordinates | 3677893..3678213 (-) | Length | 106 a.a. |
| NCBI ID | WP_005318073.1 | Uniprot ID | A4SJ96 |
| Organism | Aeromonas salmonicida subsp. salmonicida strain J409 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3672893..3683213
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GO992_RS17515 (GO992_17515) | - | 3673177..3673875 (-) | 699 | WP_005318084.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| GO992_RS17520 (GO992_17520) | - | 3674229..3675200 (+) | 972 | WP_011898383.1 | response regulator | - |
| GO992_RS17525 (GO992_17525) | - | 3675276..3676673 (-) | 1398 | WP_017412884.1 | peptide MFS transporter | - |
| GO992_RS17530 (GO992_17530) | galU | 3676887..3677798 (-) | 912 | WP_159364359.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| GO992_RS17535 (GO992_17535) | comEA | 3677893..3678213 (-) | 321 | WP_005318073.1 | ComEA family DNA-binding protein | Machinery gene |
| GO992_RS17540 (GO992_17540) | cysQ | 3678381..3679151 (+) | 771 | WP_005318069.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| GO992_RS17545 (GO992_17545) | - | 3679233..3679529 (-) | 297 | WP_005318066.1 | YciI family protein | - |
| GO992_RS17550 (GO992_17550) | - | 3679556..3680107 (-) | 552 | WP_005318063.1 | septation protein A | - |
| GO992_RS17555 (GO992_17555) | - | 3680193..3681728 (-) | 1536 | WP_034283547.1 | pyridoxal-dependent decarboxylase | - |
| GO992_RS17560 (GO992_17560) | - | 3681953..3682588 (+) | 636 | WP_017412882.1 | PAQR family membrane homeostasis protein TrhA | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11222.15 Da Isoelectric Point: 10.0215
>NTDB_id=413085 GO992_RS17535 WP_005318073.1 3677893..3678213(-) (comEA) [Aeromonas salmonicida subsp. salmonicida strain J409]
MNYKILTATLLLSCLPLLSQPLLAADKPAAKPATTVTTAKESGKVNLNTASINELTALKGIGEKKAQAIVDFRQKQGKFT
TVEQLADVSGIGPATLEANRDMIIVK
MNYKILTATLLLSCLPLLSQPLLAADKPAAKPATTVTTAKESGKVNLNTASINELTALKGIGEKKAQAIVDFRQKQGKFT
TVEQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=413085 GO992_RS17535 WP_005318073.1 3677893..3678213(-) (comEA) [Aeromonas salmonicida subsp. salmonicida strain J409]
ATGAACTACAAAATCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGCTCAGCCAGCCTTTGCTGGCCGCCGACAA
GCCGGCTGCCAAGCCAGCGACCACGGTCACCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACGGCCAGTATCAATG
AGTTAACTGCCCTCAAGGGGATCGGAGAGAAGAAGGCGCAGGCCATCGTCGATTTTCGTCAGAAACAGGGCAAGTTCACC
ACGGTTGAACAACTGGCGGATGTCAGCGGCATAGGGCCGGCCACTCTGGAAGCAAATCGGGACATGATCATCGTCAAATA
G
ATGAACTACAAAATCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGCTCAGCCAGCCTTTGCTGGCCGCCGACAA
GCCGGCTGCCAAGCCAGCGACCACGGTCACCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACGGCCAGTATCAATG
AGTTAACTGCCCTCAAGGGGATCGGAGAGAAGAAGGCGCAGGCCATCGTCGATTTTCGTCAGAAACAGGGCAAGTTCACC
ACGGTTGAACAACTGGCGGATGTCAGCGGCATAGGGCCGGCCACTCTGGAAGCAAATCGGGACATGATCATCGTCAAATA
G
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
50 |
100 |
0.519 |
| comEA | Vibrio cholerae strain A1552 |
50 |
100 |
0.519 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
46.392 |
91.509 |
0.425 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
42.453 |
100 |
0.425 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
61.905 |
59.434 |
0.368 |