Detailed information
Bioinformatically predicted
Overview
| Name | rcrQ | Type | Regulator |
| Locus tag | GSU40_RS17140 | Genome accession | NZ_CP047185 |
| Coordinates | 392423..392743 (+) | Length | 106 a.a. |
| NCBI ID | WP_208543347.1 | Uniprot ID | - |
| Organism | Rathayibacter sp. VKM Ac-2805 | ||
| Function | regulate competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 387423..397743
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GSU40_RS01785 (GSU40_01785) | - | 387606..390086 (+) | 2481 | WP_244229557.1 | glycoside hydrolase family 2 protein | - |
| GSU40_RS17010 | - | 390093..392489 (+) | 2397 | WP_279630836.1 | ROK family protein | - |
| GSU40_RS17140 (GSU40_01800) | rcrQ | 392423..392743 (+) | 321 | WP_208543347.1 | ATP-binding cassette domain-containing protein | Regulator |
| GSU40_RS01805 (GSU40_01805) | - | 392892..393311 (+) | 420 | WP_104224305.1 | hypothetical protein | - |
| GSU40_RS01810 (GSU40_01810) | - | 393359..393787 (+) | 429 | WP_348271955.1 | ATP-dependent DNA ligase | - |
| GSU40_RS01815 (GSU40_01815) | - | 393819..394577 (-) | 759 | WP_160033294.1 | aldolase/citrate lyase family protein | - |
| GSU40_RS01820 (GSU40_01820) | - | 394863..396929 (+) | 2067 | WP_160033296.1 | family 43 glycosylhydrolase | - |
| GSU40_RS01825 (GSU40_01825) | - | 396994..397635 (-) | 642 | WP_244229558.1 | response regulator transcription factor | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11530.23 Da Isoelectric Point: 10.6476
>NTDB_id=411331 GSU40_RS17140 WP_208543347.1 392423..392743(+) (rcrQ) [Rathayibacter sp. VKM Ac-2805]
MGERGALLSGGQRQRLAIARALIRDPRLLVLDEATAALDPRTEREVRLALERLREGRTTLIVAHRLSTVRTADRIVVLSE
GRVVEQGTHDELLATGGAYAALHATA
MGERGALLSGGQRQRLAIARALIRDPRLLVLDEATAALDPRTEREVRLALERLREGRTTLIVAHRLSTVRTADRIVVLSE
GRVVEQGTHDELLATGGAYAALHATA
Nucleotide
Download Length: 321 bp
>NTDB_id=411331 GSU40_RS17140 WP_208543347.1 392423..392743(+) (rcrQ) [Rathayibacter sp. VKM Ac-2805]
GTGGGGGAGCGGGGCGCCCTGCTGTCGGGAGGCCAGCGCCAGCGCCTCGCGATCGCGCGGGCCCTGATCCGCGACCCCCG
TCTGCTCGTGCTCGACGAGGCGACCGCCGCACTCGATCCGCGCACCGAGCGCGAGGTCCGGCTCGCCCTCGAGCGGCTGC
GCGAGGGGCGCACGACGCTGATCGTCGCCCACCGCCTGAGCACCGTCCGCACGGCCGACCGGATCGTGGTGCTCAGCGAG
GGGCGCGTCGTGGAGCAGGGGACGCACGATGAGCTGCTCGCGACGGGCGGCGCGTACGCCGCGCTGCACGCGACGGCCTG
A
GTGGGGGAGCGGGGCGCCCTGCTGTCGGGAGGCCAGCGCCAGCGCCTCGCGATCGCGCGGGCCCTGATCCGCGACCCCCG
TCTGCTCGTGCTCGACGAGGCGACCGCCGCACTCGATCCGCGCACCGAGCGCGAGGTCCGGCTCGCCCTCGAGCGGCTGC
GCGAGGGGCGCACGACGCTGATCGTCGCCCACCGCCTGAGCACCGTCCGCACGGCCGACCGGATCGTGGTGCTCAGCGAG
GGGCGCGTCGTGGAGCAGGGGACGCACGATGAGCTGCTCGCGACGGGCGGCGCGTACGCCGCGCTGCACGCGACGGCCTG
A
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rcrQ | Streptococcus mutans UA159 |
54.167 |
90.566 |
0.491 |
| rcrP | Streptococcus mutans UA159 |
50.505 |
93.396 |
0.472 |
| comA/nlmT | Streptococcus mutans UA159 |
48.98 |
92.453 |
0.453 |
| comA | Streptococcus mitis SK321 |
48.98 |
92.453 |
0.453 |
| comA | Streptococcus mitis NCTC 12261 |
48.98 |
92.453 |
0.453 |
| comA | Streptococcus pneumoniae TIGR4 |
47.959 |
92.453 |
0.443 |
| comA | Streptococcus pneumoniae Rx1 |
47.959 |
92.453 |
0.443 |
| comA | Streptococcus pneumoniae D39 |
47.959 |
92.453 |
0.443 |
| comA | Streptococcus pneumoniae R6 |
47.959 |
92.453 |
0.443 |
| comA | Streptococcus gordonii str. Challis substr. CH1 |
46.939 |
92.453 |
0.434 |