Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   SGPB_RS10295 Genome accession   NC_015600
Coordinates   2097975..2099240 (+) Length   421 a.a.
NCBI ID   WP_013852370.1    Uniprot ID   A0AAE6YQ67
Organism   Streptococcus pasteurianus ATCC 43144     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2092975..2104240
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SGPB_RS10270 (SGPB_2023) - 2093442..2096036 (+) 2595 WP_013852369.1 YfhO family protein -
  SGPB_RS11780 - 2096475..2096812 (+) 338 Protein_2039 helix-turn-helix domain-containing protein -
  SGPB_RS10290 (SGPB_2024) rlmH 2097285..2097764 (-) 480 WP_003067023.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  SGPB_RS10295 (SGPB_2025) htrA 2097975..2099240 (+) 1266 WP_013852370.1 S1C family serine protease Regulator
  SGPB_RS10300 (SGPB_2026) spo0J 2099300..2100076 (+) 777 WP_003067028.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 421 a.a.        Molecular weight: 43814.70 Da        Isoelectric Point: 4.1803

>NTDB_id=41098 SGPB_RS10295 WP_013852370.1 2097975..2099240(+) (htrA) [Streptococcus pasteurianus ATCC 43144]
MKKIKLPKLPKLPKFNYKNWLKPLGVILVGFIAGIAGTILVLNMAGISITNVSGSSTKTTTSSVSYSNSNDTTKAVEKVQ
DAVVSVINYKSDSSSSASDLYNQMFGNDSDSSSNSSSTDDLTVYSEGSGVIYKKDGDSAYVVTNNHVIDGAEQIEIMLAN
GTKVVGELVGADTYSDIAVVKISSDNVSTVAEFADSDKLTVGETAIAIGSPLGTEYANSVTQGIVSSLSRTVTMTNDDGE
TISTNAIQTDAAINPGNSGGALINIEGQVIGINSSKISSTSSSGESVEGMGFAIPSNDVVSIINQLEENGQVIRPALGIS
MINLSDLSTNAIAQLNIPTSVTSGVVVAAVQSGMPAEGNLEQYDVITAIDDKEVTSTSDLQSILYTHSVGDSVKVTFYRG
TDKKTATIELTKTTQDLSSSN

Nucleotide


Download         Length: 1266 bp        

>NTDB_id=41098 SGPB_RS10295 WP_013852370.1 2097975..2099240(+) (htrA) [Streptococcus pasteurianus ATCC 43144]
GTGAAAAAAATAAAATTACCAAAATTACCAAAGTTACCAAAATTTAATTACAAAAATTGGTTAAAACCATTGGGTGTCAT
TTTAGTCGGCTTTATAGCTGGTATCGCAGGTACAATACTCGTCCTAAACATGGCAGGTATTTCAATCACTAACGTCAGTG
GTTCAAGTACAAAAACAACAACAAGTAGCGTAAGCTATTCTAACTCTAACGATACAACAAAAGCTGTGGAAAAAGTTCAA
GACGCGGTTGTATCTGTTATTAACTACAAATCAGACTCGTCATCTTCTGCAAGTGACCTCTACAATCAAATGTTTGGCAA
TGACTCAGACAGTAGTAGCAATTCAAGCTCTACAGATGATTTGACTGTTTACAGTGAGGGGTCTGGGGTTATTTACAAAA
AAGATGGTGATTCTGCCTATGTCGTCACTAACAATCACGTTATTGATGGTGCCGAACAAATTGAAATCATGCTTGCTAAT
GGAACAAAAGTTGTTGGTGAGCTAGTCGGAGCAGATACTTATTCAGATATTGCTGTTGTTAAAATTTCTTCTGACAATGT
ATCTACAGTTGCTGAATTTGCCGATTCTGATAAATTGACTGTCGGTGAAACTGCTATCGCTATTGGTAGCCCACTTGGTA
CTGAATATGCTAACTCTGTAACACAAGGTATTGTCTCAAGTCTTAGCCGTACAGTAACCATGACAAATGATGATGGTGAA
ACTATCTCAACAAATGCTATCCAAACAGATGCAGCAATTAACCCAGGTAACTCTGGTGGTGCTTTAATTAACATTGAAGG
ACAAGTTATCGGTATCAATTCAAGTAAGATTTCATCTACATCAAGTTCTGGTGAATCTGTCGAAGGTATGGGATTTGCCA
TTCCATCTAACGATGTTGTATCCATTATTAACCAATTGGAAGAAAATGGGCAAGTTATCCGCCCAGCACTTGGTATTTCA
ATGATAAACTTGAGCGATCTTTCAACTAATGCAATTGCTCAACTTAACATTCCAACAAGTGTAACAAGCGGTGTCGTTGT
TGCCGCTGTTCAATCTGGTATGCCTGCTGAAGGTAATCTCGAACAGTACGATGTCATCACAGCTATTGACGACAAAGAAG
TAACATCTACTTCAGATCTTCAAAGTATTCTTTATACTCATTCTGTTGGTGACTCTGTCAAAGTAACCTTCTACCGTGGA
ACTGATAAGAAAACAGCTACAATTGAATTAACTAAGACAACGCAAGATTTATCTTCCTCAAACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

64.938

96.2

0.625

  htrA Streptococcus gordonii str. Challis substr. CH1

59.804

96.912

0.58

  htrA Streptococcus pneumoniae D39

57.664

97.625

0.563

  htrA Streptococcus pneumoniae TIGR4

57.664

97.625

0.563

  htrA Streptococcus mitis NCTC 12261

57.664

97.625

0.563

  htrA Streptococcus pneumoniae R6

57.664

97.625

0.563

  htrA Streptococcus pneumoniae Rx1

57.664

97.625

0.563


Multiple sequence alignment