Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   SGPB_RS01550 Genome accession   NC_015600
Coordinates   283918..284673 (+) Length   251 a.a.
NCBI ID   WP_003063294.1    Uniprot ID   -
Organism   Streptococcus pasteurianus ATCC 43144     
Function   degradation of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 278918..289673
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SGPB_RS01535 (SGPB_0265) - 279327..280898 (-) 1572 WP_003063286.1 ABC transporter permease subunit -
  SGPB_RS01540 (SGPB_0266) - 281031..282926 (+) 1896 WP_013851459.1 DUF2207 domain-containing protein -
  SGPB_RS01545 (SGPB_0267) - 282978..283817 (+) 840 WP_003063292.1 undecaprenyl-diphosphate phosphatase -
  SGPB_RS01550 (SGPB_0268) mecA 283918..284673 (+) 756 WP_003063294.1 adaptor protein MecA Regulator
  SGPB_RS01555 (SGPB_0269) - 284675..285838 (+) 1164 WP_003063296.1 glycosyltransferase family 4 protein -
  SGPB_RS01560 (SGPB_0270) sufC 285952..286722 (+) 771 WP_003063299.1 Fe-S cluster assembly ATPase SufC -
  SGPB_RS01565 (SGPB_0271) sufD 286796..288058 (+) 1263 WP_013851460.1 Fe-S cluster assembly protein SufD -
  SGPB_RS01570 (SGPB_0272) - 288060..289292 (+) 1233 WP_003063302.1 cysteine desulfurase -

Sequence

Protein


Download         Length: 251 a.a.        Molecular weight: 28931.69 Da        Isoelectric Point: 4.0627

>NTDB_id=41058 SGPB_RS01550 WP_003063294.1 283918..284673(+) (mecA) [Streptococcus pasteurianus ATCC 43144]
MEMKQISETTLKITISMEDLEERGMELKDFLIPQEKTEEFFYSVMDELDLPDNFKDSGMLSFRVTPRKDRIDVFVTKSEI
NKEINFEDLAAFDDVSNMSPEEFFKTLEQTMLSKGDTEAHEKLGKIEEMMESAVEEVLTEQAQTEPSEDDINPSDYVHYV
FDFQTLEAVVAFAKAIDFPVEASELYKDGGLYHMTILLDLQNHPSYYANLMYARLLEYASTGTKTRAYLQEHGLEMLADD
AVVKLKMIELV

Nucleotide


Download         Length: 756 bp        

>NTDB_id=41058 SGPB_RS01550 WP_003063294.1 283918..284673(+) (mecA) [Streptococcus pasteurianus ATCC 43144]
ATGGAAATGAAACAGATTAGCGAGACAACGCTAAAAATAACGATTAGTATGGAAGATTTGGAAGAACGTGGCATGGAGTT
GAAAGATTTTTTGATTCCACAAGAAAAGACAGAGGAGTTCTTCTACTCAGTAATGGACGAATTAGATTTACCAGATAATT
TCAAAGATAGCGGAATGCTTAGTTTCCGTGTGACACCAAGAAAAGACCGTATTGATGTCTTTGTTACAAAATCTGAAATT
AATAAAGAAATTAATTTTGAAGATTTAGCTGCATTTGACGACGTGTCAAACATGTCACCTGAGGAATTTTTCAAAACATT
GGAACAAACAATGCTTTCTAAAGGTGATACTGAAGCGCATGAAAAATTAGGAAAAATTGAAGAAATGATGGAAAGTGCTG
TTGAGGAGGTTCTCACAGAACAAGCTCAAACAGAACCATCAGAAGATGACATTAATCCATCTGACTATGTTCATTATGTC
TTTGATTTTCAAACGCTTGAAGCTGTAGTAGCCTTTGCTAAAGCAATTGATTTTCCGGTTGAAGCATCAGAACTCTACAA
AGATGGTGGTCTTTACCACATGACCATTTTACTTGATTTACAAAATCATCCGTCATACTATGCGAATTTGATGTATGCTC
GTTTGTTGGAATATGCTAGCACAGGTACAAAAACGCGTGCTTATTTGCAAGAGCACGGTCTTGAAATGTTAGCAGATGAC
GCTGTTGTAAAATTAAAAATGATTGAGTTGGTATAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-245)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Streptococcus mutans UA159

66.532

98.805

0.657
  mecA Streptococcus thermophilus LMD-9

59.919

98.406

0.59
  mecA Streptococcus thermophilus LMG 18311

59.514

98.406

0.586
  mecA Streptococcus pneumoniae Rx1

48.221

100

0.486
  mecA Streptococcus pneumoniae D39

48.221

100

0.486
  mecA Streptococcus pneumoniae R6

48.221

100

0.486
  mecA Streptococcus pneumoniae TIGR4

48.221

100

0.486

Multiple sequence alignment