Detailed information NTG0409411

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: GPZ88_RS03585
• Genome accession: NZ_CP046919
• Coordinates: 695110..696177 (-)
• Length: 355 a.a.
• NCBI ID: WP_015695757.1
• Uniprot ID: A0A6G8HZL6
• Organism: Streptococcus ruminicola strain CNU_G2
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 690110..701177

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GPZ88_RS03565 (GPZ88_03535)	rnpA	690555..690914 (-)	360	WP_006531772.1	ribonuclease P protein component	-
GPZ88_RS03570 (GPZ88_03540)	argH	691055..692449 (-)	1395	WP_166043424.1	argininosuccinate lyase	-
GPZ88_RS03575 (GPZ88_03545)	-	692799..693989 (-)	1191	WP_166043426.1	argininosuccinate synthase	-
GPZ88_RS03580 (GPZ88_03550)	amiF	694188..695117 (-)	930	WP_166043428.1	ATP-binding cassette domain-containing protein	Regulator
GPZ88_RS03585 (GPZ88_03555)	amiE	695110..696177 (-)	1068	WP_015695757.1	ABC transporter ATP-binding protein	Regulator
GPZ88_RS03590 (GPZ88_03560)	amiD	696186..697112 (-)	927	WP_015695758.1	oligopeptide ABC transporter permease OppC	Regulator
GPZ88_RS03595 (GPZ88_03565)	amiC	697112..698611 (-)	1500	WP_134775673.1	ABC transporter permease	Regulator
GPZ88_RS03600 (GPZ88_03570)	amiA	698672..700645 (-)	1974	WP_166043430.1	peptide ABC transporter substrate-binding protein	Regulator

Sequence

Protein

• Length: 355 a.a.
• Molecular weight: 39667.61 Da
• Isoelectric Point: 6.0022

>NTDB_id=409411 GPZ88_RS03585 WP_015695757.1 695110..696177(-) (amiE) [Streptococcus ruminicola strain CNU_G2]
MTDKNKVLSVRDMVVEFEVRDRILTAIRNISIDLYEGEVLAVVGESGSGKSVLTKTFTGMLESNGRIAKGSINYRGQDLT
KIKSNSEWGKIRGGKIATIFQDPMTSLDPIQTIGSQITEAIIKHQGASKSEAKELAIDYMKKVGIPEAKKRFNEYPFQYS
GGMRQRIVIAIALACKPDILICDEPTTALDVTIQAQIINLLKELQREYNFTTIFITHDLGVVASIADKVAVMYAGDIVEY
GTVEEIFYDPKHPYTWSLLSSLPQLADDNGVLFSIPGTPPSLYTPIKGDAFAPRSRYAMKIDFEEDVPKFPVTETHWAKT
WLLHPDAPKVEKPEVIQNLHQKISRKMINLEEGND

Nucleotide

• Length: 1068 bp

>NTDB_id=409411 GPZ88_RS03585 WP_015695757.1 695110..696177(-) (amiE) [Streptococcus ruminicola strain CNU_G2]
ATGACTGATAAAAATAAAGTTTTAAGTGTTCGAGATATGGTTGTTGAATTTGAAGTTCGAGATCGTATTTTAACAGCTAT
TCGTAATATTTCAATTGATCTTTATGAAGGTGAAGTTCTTGCTGTTGTAGGTGAGTCTGGTAGTGGAAAATCAGTCCTAA
CGAAAACATTCACAGGAATGTTGGAATCAAATGGACGTATCGCTAAGGGCTCTATTAATTATCGCGGTCAAGATTTAACA
AAAATTAAGTCAAATTCAGAATGGGGAAAAATTCGTGGTGGTAAGATTGCGACAATTTTCCAAGATCCAATGACGAGTCT
TGATCCAATTCAAACGATTGGTAGCCAAATTACAGAAGCTATTATCAAACATCAAGGAGCAAGTAAGAGTGAAGCTAAGG
AACTAGCAATTGATTATATGAAAAAAGTAGGCATTCCTGAAGCAAAGAAACGTTTTAATGAATATCCATTTCAGTATTCA
GGTGGGATGCGTCAACGTATTGTCATTGCGATTGCTTTGGCTTGTAAGCCAGATATCTTGATTTGTGACGAGCCTACGAC
CGCCCTTGATGTAACAATTCAGGCTCAAATTATTAATCTTTTAAAGGAGTTGCAAAGAGAATATAATTTCACAACTATTT
TTATCACACACGATTTAGGTGTGGTTGCAAGTATTGCTGATAAGGTAGCTGTCATGTATGCGGGTGATATTGTTGAGTAT
GGAACAGTTGAAGAGATTTTTTATGATCCTAAACATCCCTATACTTGGAGTTTATTATCAAGCCTTCCTCAATTGGCTGA
TGACAATGGTGTTCTCTTTTCGATTCCAGGGACACCGCCTTCATTGTATACACCTATTAAAGGTGACGCTTTTGCTCCTC
GTTCTCGCTATGCAATGAAAATTGATTTTGAAGAGGATGTTCCTAAATTTCCTGTAACCGAAACTCACTGGGCAAAAACA
TGGTTACTTCATCCAGATGCACCGAAGGTTGAAAAACCAGAGGTCATTCAAAATCTACATCAAAAGATTTCTCGAAAAAT
GATTAACTTGGAGGAAGGAAATGACTGA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (238-300)

• ABC transporter (ABC_tran) (28-186)

3D structure

• AlphaFold DB: A0A6G8HZL6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	78.711	100	0.792
amiE	Streptococcus thermophilus LMG 18311	77.591	100	0.78
amiE	Streptococcus thermophilus LMD-9	77.591	100	0.78
oppD	Streptococcus mutans UA159	55.114	99.155	0.546