Detailed information NTG0409219

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: GQA94_RS05910
• Genome accession: NZ_CP046902
• Coordinates: 1271037..1272101 (+)
• Length: 354 a.a.
• NCBI ID: WP_158187206.1
• Uniprot ID: A0A6I6LLA1
• Organism: Stutzerimonas stutzeri strain PM101005
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1266037..1277101

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GQA94_RS05895 (GQA94_05895)	-	1266045..1266839 (+)	795	WP_158187203.1	thermonuclease family protein	-
GQA94_RS05900 (GQA94_05900)	-	1267010..1268278 (+)	1269	WP_158187204.1	malic enzyme-like NAD(P)-binding protein	-
GQA94_RS05905 (GQA94_05905)	-	1268414..1270852 (-)	2439	WP_158187205.1	penicillin-binding protein 1A	-
GQA94_RS05910 (GQA94_05910)	comM	1271037..1272101 (+)	1065	WP_158187206.1	pilus assembly protein PilM	Machinery gene
GQA94_RS05915 (GQA94_05915)	pilN	1272101..1272673 (+)	573	WP_158187207.1	type 4a pilus biogenesis protein PilN	-
GQA94_RS05920 (GQA94_05920)	pilO	1272670..1273293 (+)	624	WP_158187208.1	type 4a pilus biogenesis protein PilO	-
GQA94_RS05925 (GQA94_05925)	pilP	1273290..1273817 (+)	528	WP_158187209.1	type 4a pilus biogenesis lipoprotein PilP	-
GQA94_RS05930 (GQA94_05930)	pilQ	1273869..1275980 (+)	2112	WP_158187210.1	type IV pilus secretin PilQ family protein	Machinery gene
GQA94_RS05935 (GQA94_05935)	aroK	1276012..1276530 (+)	519	WP_158190043.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37675.12 Da
• Isoelectric Point: 4.6270

>NTDB_id=409219 GQA94_RS05910 WP_158187206.1 1271037..1272101(+) (comM) [Stutzerimonas stutzeri strain PM101005]
MLGLFTKKANTLLGIDISSTSVKLLELSRSGARYRVESFAVEPLPPNAVVEKNIAELEGVGQALSRLLAKAKTGVKSAAV
AVSGSAVITKSIEMDAGLGDDDLENQLKIEADQYIPYPLEEVAIDFEVQGPAARAPGRVEVLLAACRKENVEIREAALAL
AGLTAKVVDVEAYALERSFGLLAPQLGAGHDELTVALVDIGATMTTLSVLHNGRTIYTREQLFGGRQLTEEIQRRYGLSM
EEAGLAKKQGGLPDDYDSEVLQPFKEAVVQQVSRSLQFFFAAGQFHDVDYILLAGGTASIPGLDRLIQQKIGTQTLVANP
FADMALSSKVNAGALASDAPSLMIACGLALRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=409219 GQA94_RS05910 WP_158187206.1 1271037..1272101(+) (comM) [Stutzerimonas stutzeri strain PM101005]
GTGCTAGGGCTCTTCACTAAGAAAGCGAACACGCTGCTTGGGATCGACATCAGTTCGACATCCGTCAAGCTACTCGAATT
AAGCCGCTCAGGCGCTCGGTATCGGGTTGAGTCTTTTGCTGTCGAGCCGCTTCCGCCGAACGCGGTGGTGGAGAAGAACA
TCGCCGAACTGGAGGGTGTGGGGCAGGCGCTGTCTCGGCTGCTGGCCAAGGCGAAGACAGGCGTCAAGTCCGCCGCCGTC
GCGGTTTCCGGTTCGGCGGTCATCACCAAAAGCATCGAGATGGATGCCGGGCTTGGCGACGATGACCTGGAAAACCAGCT
GAAGATCGAGGCTGACCAGTACATTCCCTATCCGCTGGAAGAAGTGGCTATCGACTTCGAAGTACAGGGCCCGGCCGCCC
GCGCTCCGGGACGGGTCGAGGTGCTGCTGGCGGCGTGCCGCAAGGAGAACGTCGAAATTCGCGAGGCGGCTCTCGCGCTG
GCCGGACTGACGGCCAAGGTCGTGGACGTCGAGGCGTATGCGCTCGAACGTTCGTTCGGCCTGTTGGCGCCCCAGCTGGG
CGCGGGCCACGATGAGCTGACCGTCGCGCTTGTCGATATCGGTGCGACCATGACCACGCTCAGCGTGCTGCACAACGGTC
GCACTATCTATACGCGGGAGCAGCTGTTCGGCGGGCGCCAGCTGACCGAGGAGATCCAGCGTCGTTACGGCTTGTCGATG
GAAGAGGCCGGCCTCGCCAAAAAACAGGGAGGCCTCCCGGATGACTATGACAGCGAAGTGTTGCAACCGTTCAAGGAAGC
CGTCGTCCAGCAGGTGTCGCGCTCGCTCCAGTTCTTCTTTGCGGCCGGGCAGTTTCACGACGTCGATTACATTCTCCTGG
CTGGCGGCACGGCTTCCATTCCCGGGCTCGACCGGTTGATTCAGCAGAAAATCGGCACCCAGACTCTAGTCGCCAACCCG
TTTGCCGATATGGCCTTGAGTAGCAAGGTCAACGCTGGCGCCCTCGCCAGCGATGCGCCATCTCTGATGATTGCCTGCGG
ATTGGCCTTGAGGAGTTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

3D structure

• AlphaFold DB: A0A6I6LLA1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	56.78	100	0.568
pilM	Acinetobacter baumannii D1279779	56.78	100	0.568
comM	Acinetobacter baylyi ADP1	54.52	100	0.545
pilM	Legionella pneumophila strain ERS1305867	46.893	100	0.469