Detailed information NTG0409116

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: GP482_RS04620
• Genome accession: NZ_CP046875
• Coordinates: 942120..943190 (-)
• Length: 356 a.a.
• NCBI ID: WP_039696676.1
• Uniprot ID: A0A091BTF1
• Organism: Streptococcus ruminicola strain CNU_77-61
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 937120..948190

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GP482_RS04600 (GP482_04600)	-	938151..938957 (-)	807	WP_158914119.1	ABC transporter permease	-
GP482_RS04605 (GP482_04605)	-	938958..939890 (-)	933	WP_158914121.1	glycosyltransferase family 2 protein	-
GP482_RS04610 (GP482_04610)	-	939880..941034 (-)	1155	WP_074560552.1	DUF1972 domain-containing protein	-
GP482_RS04615 (GP482_04615)	amiF	941201..942127 (-)	927	WP_039696677.1	ATP-binding cassette domain-containing protein	Regulator
GP482_RS04620 (GP482_04620)	amiE	942120..943190 (-)	1071	WP_039696676.1	ABC transporter ATP-binding protein	Regulator
GP482_RS04625 (GP482_04625)	amiD	943199..944125 (-)	927	WP_158914123.1	oligopeptide ABC transporter permease OppC	Regulator
GP482_RS04630 (GP482_04630)	amiC	944125..945627 (-)	1503	WP_074799225.1	ABC transporter permease	Regulator
GP482_RS04635 (GP482_04635)	amiA	945695..947668 (-)	1974	WP_039696673.1	peptide ABC transporter substrate-binding protein	Regulator

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 39789.01 Da
• Isoelectric Point: 7.1729

>NTDB_id=409116 GP482_RS04620 WP_039696676.1 942120..943190(-) (amiE) [Streptococcus ruminicola strain CNU_77-61]
MVSENVIISVNNLVVKFKVRNRLLTAIRNISLDLYKGEVLAIVGESGSGKSVLTKTFTGMLESNGFISNGSILYRGQELT
NLKSNKDWESIRGSKIATIFQDPMTSLDPIKTIGSQIVDVIVKHQQLSKTEAKAMALNYMKEVGISDVERRFDEYPFQYS
GGMRQRIVIAIALACKPDVLICDEPTTALDVTIQAQILALLKRLQKEYQFTTIFITHDLGVVASIADKVAVMYAGQIIEY
ATVEELFYDPKHPYTWSLLSSLPQLADEKSGLLFSIPGAPPSLYASIQGDAFAPRSHFAMKIDFTEEPPIFNVSKTHWAK
TWLLHPDAPKVDKPEIIQDLHHKISQKMLSKERENA

Nucleotide

• Length: 1071 bp

>NTDB_id=409116 GP482_RS04620 WP_039696676.1 942120..943190(-) (amiE) [Streptococcus ruminicola strain CNU_77-61]
ATGGTTAGTGAAAATGTAATAATTAGCGTGAATAACTTAGTTGTAAAATTTAAGGTTCGTAATCGTCTTTTGACAGCTAT
CCGAAATATTTCGCTGGATCTTTATAAAGGAGAAGTTCTTGCAATTGTTGGGGAGTCTGGAAGCGGGAAATCTGTTCTAA
CCAAAACTTTTACAGGGATGCTAGAAAGTAATGGTTTTATTTCAAATGGTTCTATTTTATATCGCGGACAAGAGTTAACT
AATTTAAAATCAAATAAAGATTGGGAGTCAATTCGTGGAAGTAAGATTGCTACTATTTTTCAAGATCCAATGACTTCTCT
TGACCCCATAAAAACGATTGGCAGTCAGATTGTTGATGTTATTGTTAAGCATCAACAGCTTTCAAAAACGGAAGCTAAAG
CAATGGCTCTAAACTATATGAAAGAAGTTGGAATTTCTGATGTAGAACGCAGATTTGATGAATATCCTTTTCAATATTCA
GGTGGTATGCGACAACGTATTGTTATCGCTATTGCGCTTGCTTGTAAGCCGGATGTCTTGATTTGTGATGAACCAACGAC
AGCACTTGATGTTACCATCCAAGCACAGATCCTTGCGTTATTAAAAAGATTGCAAAAAGAATATCAATTTACAACTATTT
TTATCACGCACGACTTAGGTGTCGTAGCTAGTATCGCTGATAAAGTTGCTGTCATGTATGCAGGACAAATTATTGAGTAT
GCAACAGTTGAAGAACTCTTTTATGATCCAAAGCATCCGTATACATGGAGTTTATTATCTAGTCTTCCTCAATTAGCTGA
TGAAAAAAGTGGCTTGCTTTTTTCAATTCCTGGTGCCCCTCCCTCTCTTTATGCGTCAATTCAAGGTGATGCATTTGCTC
CGCGATCACATTTTGCAATGAAAATTGATTTTACGGAAGAACCACCGATTTTTAATGTATCAAAAACGCATTGGGCTAAA
ACTTGGTTACTTCATCCAGATGCTCCAAAAGTTGATAAACCGGAGATTATCCAAGATTTACATCATAAGATTTCGCAAAA
AATGTTGAGTAAGGAGAGAGAAAATGCCTGA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (28-186)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (238-301)

3D structure

• AlphaFold DB: A0A091BTF1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	76.012	97.191	0.739
amiE	Streptococcus thermophilus LMG 18311	74.277	97.191	0.722
amiE	Streptococcus thermophilus LMD-9	74.277	97.191	0.722
oppD	Streptococcus mutans UA159	55.367	99.438	0.551