Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | GPY06_RS11250 | Genome accession | NZ_CP046820 |
| Coordinates | 1201611..1202201 (-) | Length | 196 a.a. |
| NCBI ID | WP_000135851.1 | Uniprot ID | A0A067BH58 |
| Organism | Vibrio metoecus strain 2011V-1015 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1196611..1207201
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GPY06_RS11230 | aroB | 1197538..1198623 (-) | 1086 | WP_167517860.1 | 3-dehydroquinate synthase | - |
| GPY06_RS11235 | aroK | 1198651..1199175 (-) | 525 | WP_000818614.1 | shikimate kinase AroK | - |
| GPY06_RS11240 | pilQ | 1199362..1201077 (-) | 1716 | WP_167517861.1 | type IV pilus secretin PilQ | Machinery gene |
| GPY06_RS11245 | pilP | 1201103..1201621 (-) | 519 | WP_000794742.1 | pilus assembly protein PilP | Machinery gene |
| GPY06_RS11250 | pilO | 1201611..1202201 (-) | 591 | WP_000135851.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| GPY06_RS11255 | pilN | 1202194..1202772 (-) | 579 | WP_167517862.1 | PilN domain-containing protein | Machinery gene |
| GPY06_RS11260 | pilM | 1202762..1203778 (-) | 1017 | WP_158120071.1 | type IV pilus assembly protein PilM | Machinery gene |
| GPY06_RS11265 | - | 1203920..1206397 (+) | 2478 | WP_167517863.1 | penicillin-binding protein 1A | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 22853.18 Da Isoelectric Point: 4.3574
>NTDB_id=408360 GPY06_RS11250 WP_000135851.1 1201611..1202201(-) (pilO) [Vibrio metoecus strain 2011V-1015]
MASFQELELDEMAEWPVLPQLLVILLLMLLVQGAGYWFYLMPKQDEIAALKQEEETVKATLRIKANKVAALPQIQAQLDE
LNERYDFLLRQLPVQKELASMLASVNQLGLDNSLTFTRIDWGERQAQEFLYRLPLNIELTGNYHDIGDFSEAIAKLPRII
NFDDIDWQRVSQESSTLHFRVKAYTYQFKQEVEDEK
MASFQELELDEMAEWPVLPQLLVILLLMLLVQGAGYWFYLMPKQDEIAALKQEEETVKATLRIKANKVAALPQIQAQLDE
LNERYDFLLRQLPVQKELASMLASVNQLGLDNSLTFTRIDWGERQAQEFLYRLPLNIELTGNYHDIGDFSEAIAKLPRII
NFDDIDWQRVSQESSTLHFRVKAYTYQFKQEVEDEK
Nucleotide
Download Length: 591 bp
>NTDB_id=408360 GPY06_RS11250 WP_000135851.1 1201611..1202201(-) (pilO) [Vibrio metoecus strain 2011V-1015]
ATGGCTAGTTTTCAAGAGTTAGAACTGGACGAAATGGCAGAATGGCCGGTGTTACCCCAATTGTTGGTGATCTTGCTGCT
GATGCTATTGGTGCAAGGCGCAGGATACTGGTTTTATCTGATGCCCAAACAAGATGAGATCGCAGCACTCAAGCAGGAGG
AAGAAACCGTCAAAGCCACGTTACGCATCAAAGCGAACAAAGTGGCTGCTTTACCACAGATCCAAGCTCAATTGGATGAA
TTGAATGAGCGTTACGATTTCTTACTACGCCAACTACCAGTACAAAAAGAGCTAGCCAGTATGCTGGCATCGGTAAACCA
ACTTGGTCTGGATAATTCCCTAACATTTACTCGGATTGATTGGGGGGAGCGTCAGGCTCAAGAGTTTTTGTATCGCCTTC
CTCTCAATATTGAGCTGACTGGGAATTATCACGATATCGGAGATTTTTCCGAGGCAATCGCCAAGTTACCGCGGATTATC
AACTTTGATGACATCGATTGGCAGCGGGTTAGCCAAGAAAGTAGCACGCTGCATTTTCGGGTAAAAGCCTACACCTATCA
GTTTAAGCAGGAGGTGGAAGATGAAAAATAA
ATGGCTAGTTTTCAAGAGTTAGAACTGGACGAAATGGCAGAATGGCCGGTGTTACCCCAATTGTTGGTGATCTTGCTGCT
GATGCTATTGGTGCAAGGCGCAGGATACTGGTTTTATCTGATGCCCAAACAAGATGAGATCGCAGCACTCAAGCAGGAGG
AAGAAACCGTCAAAGCCACGTTACGCATCAAAGCGAACAAAGTGGCTGCTTTACCACAGATCCAAGCTCAATTGGATGAA
TTGAATGAGCGTTACGATTTCTTACTACGCCAACTACCAGTACAAAAAGAGCTAGCCAGTATGCTGGCATCGGTAAACCA
ACTTGGTCTGGATAATTCCCTAACATTTACTCGGATTGATTGGGGGGAGCGTCAGGCTCAAGAGTTTTTGTATCGCCTTC
CTCTCAATATTGAGCTGACTGGGAATTATCACGATATCGGAGATTTTTCCGAGGCAATCGCCAAGTTACCGCGGATTATC
AACTTTGATGACATCGATTGGCAGCGGGTTAGCCAAGAAAGTAGCACGCTGCATTTTCGGGTAAAAGCCTACACCTATCA
GTTTAAGCAGGAGGTGGAAGATGAAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Vibrio cholerae strain A1552 |
90.816 |
100 |
0.908 |
| pilO | Vibrio campbellii strain DS40M4 |
68.783 |
96.429 |
0.663 |