Detailed information
Bioinformatically predicted
Overview
| Name | eppA | Type | Machinery gene |
| Locus tag | METIG_RS04835 | Genome accession | NC_015562 |
| Coordinates | 975590..976624 (-) | Length | 344 a.a. |
| NCBI ID | WP_013799121.1 | Uniprot ID | F6BDF8 |
| Organism | Methanotorris igneus Kol 5 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 970590..981624
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| METIG_RS04805 (Metig_0970) | - | 971610..972056 (-) | 447 | WP_394295229.1 | hypothetical protein | - |
| METIG_RS04810 (Metig_0971) | - | 972025..972450 (-) | 426 | WP_013799116.1 | class III signal peptide-containing protein | - |
| METIG_RS09555 (Metig_0972) | - | 972509..973303 (-) | 795 | WP_013799117.1 | hypothetical protein | - |
| METIG_RS04820 (Metig_0973) | - | 973337..973966 (-) | 630 | WP_048055536.1 | hypothetical protein | - |
| METIG_RS04825 (Metig_0974) | - | 973999..975132 (-) | 1134 | WP_013799119.1 | DUF515 domain-containing protein | - |
| METIG_RS04830 (Metig_0975) | - | 975223..975600 (-) | 378 | WP_013799120.1 | class III signal peptide-containing protein | - |
| METIG_RS04835 (Metig_0976) | eppA | 975590..976624 (-) | 1035 | WP_013799121.1 | A24 family peptidase C-terminal domain-containing protein | Machinery gene |
| METIG_RS04840 (Metig_0977) | - | 976624..977007 (-) | 384 | WP_048055537.1 | cysteine-rich small domain-containing protein | - |
| METIG_RS04845 (Metig_0978) | - | 977141..977893 (+) | 753 | WP_013799123.1 | HDIG domain-containing metalloprotein | - |
| METIG_RS04850 (Metig_0979) | - | 977943..979061 (-) | 1119 | WP_013799124.1 | tRNA (guanine(10)-N(2))-dimethyltransferase | - |
| METIG_RS04860 (Metig_0980) | - | 979392..980324 (+) | 933 | WP_013799125.1 | hypothetical protein | - |
| METIG_RS04865 (Metig_0981) | - | 980305..980772 (-) | 468 | WP_013799126.1 | methanogenesis marker 9 domain-containing protein | - |
| METIG_RS04870 (Metig_0982) | - | 980836..981588 (-) | 753 | WP_157209583.1 | sugar phosphate isomerase/epimerase family protein | - |
Sequence
Protein
Download Length: 344 a.a. Molecular weight: 38920.89 Da Isoelectric Point: 8.9763
>NTDB_id=40812 METIG_RS04835 WP_013799121.1 975590..976624(-) (eppA) [Methanotorris igneus Kol 5]
MLFLSIAYVVNAILLLLASLTDIKERIIPHKYVIAMLILNLTVGYYYFGTDAIIAFFSTLILCLILSVGMGGGDVKVFSA
LAPLFAFDLVYYFPKYILVLIGLSAGLAVFFPMLKILKVYWRDILPSSLYLATVLGILVYITQIYNIPYATIVVWGYIIL
SIILSKKIPNYKEITKKLGFLFPIYLVGLYFVDTNYFISNNVFLSSLIYVGELTLISIVIYALMGAEVSDKKAIGELKEG
DILRDIIVLKDNGDVVVENANLIKRIKFLIDYEKGGKKDYKLIFTDGEGLSEETIKLLKELHKNGKIPNELNVLKTYPFI
PFVFLAYLIILIIMYKMNVGYYVI
MLFLSIAYVVNAILLLLASLTDIKERIIPHKYVIAMLILNLTVGYYYFGTDAIIAFFSTLILCLILSVGMGGGDVKVFSA
LAPLFAFDLVYYFPKYILVLIGLSAGLAVFFPMLKILKVYWRDILPSSLYLATVLGILVYITQIYNIPYATIVVWGYIIL
SIILSKKIPNYKEITKKLGFLFPIYLVGLYFVDTNYFISNNVFLSSLIYVGELTLISIVIYALMGAEVSDKKAIGELKEG
DILRDIIVLKDNGDVVVENANLIKRIKFLIDYEKGGKKDYKLIFTDGEGLSEETIKLLKELHKNGKIPNELNVLKTYPFI
PFVFLAYLIILIIMYKMNVGYYVI
Nucleotide
Download Length: 1035 bp
>NTDB_id=40812 METIG_RS04835 WP_013799121.1 975590..976624(-) (eppA) [Methanotorris igneus Kol 5]
ATGCTTTTTCTTTCAATTGCGTATGTAGTTAATGCAATTCTCTTACTTCTTGCATCTTTAACCGACATAAAAGAAAGAAT
AATCCCACATAAATACGTTATTGCAATGTTAATCCTAAATCTCACTGTTGGATATTATTACTTTGGAACTGATGCAATAA
TTGCCTTCTTCTCAACGTTGATTTTATGCCTAATATTGAGTGTAGGTATGGGAGGCGGGGATGTAAAGGTATTCTCTGCC
TTAGCTCCCCTATTTGCCTTTGATTTGGTCTATTATTTCCCAAAATATATATTAGTCCTCATTGGTTTAAGTGCAGGTTT
GGCGGTATTTTTCCCAATGCTTAAGATTTTGAAGGTTTATTGGAGAGATATATTACCTTCATCACTCTACCTCGCAACAG
TTTTGGGAATTTTGGTGTATATTACTCAAATATACAATATCCCCTATGCAACAATAGTGGTTTGGGGTTATATTATACTA
TCAATAATCCTATCTAAAAAAATTCCAAACTATAAGGAAATAACAAAAAAACTTGGATTTTTATTTCCAATTTATTTGGT
TGGGTTGTATTTTGTTGATACAAATTACTTCATTTCAAATAATGTGTTTTTGTCATCTCTAATCTATGTTGGGGAATTAA
CGCTGATTTCTATTGTAATCTACGCATTAATGGGAGCTGAGGTTTCAGATAAAAAGGCAATAGGTGAGTTAAAAGAGGGA
GATATTCTAAGGGATATTATTGTATTGAAGGATAATGGGGATGTTGTTGTTGAGAATGCCAACTTAATAAAAAGGATAAA
ATTCCTTATAGATTATGAAAAAGGTGGAAAAAAAGATTATAAGTTAATATTTACTGATGGGGAAGGATTATCAGAGGAAA
CTATAAAATTACTCAAAGAACTACATAAGAATGGAAAGATCCCAAATGAACTGAATGTTTTAAAAACTTATCCTTTTATT
CCATTTGTATTTTTAGCATATTTGATCATCCTAATCATTATGTATAAAATGAATGTGGGATATTATGTTATTTAA
ATGCTTTTTCTTTCAATTGCGTATGTAGTTAATGCAATTCTCTTACTTCTTGCATCTTTAACCGACATAAAAGAAAGAAT
AATCCCACATAAATACGTTATTGCAATGTTAATCCTAAATCTCACTGTTGGATATTATTACTTTGGAACTGATGCAATAA
TTGCCTTCTTCTCAACGTTGATTTTATGCCTAATATTGAGTGTAGGTATGGGAGGCGGGGATGTAAAGGTATTCTCTGCC
TTAGCTCCCCTATTTGCCTTTGATTTGGTCTATTATTTCCCAAAATATATATTAGTCCTCATTGGTTTAAGTGCAGGTTT
GGCGGTATTTTTCCCAATGCTTAAGATTTTGAAGGTTTATTGGAGAGATATATTACCTTCATCACTCTACCTCGCAACAG
TTTTGGGAATTTTGGTGTATATTACTCAAATATACAATATCCCCTATGCAACAATAGTGGTTTGGGGTTATATTATACTA
TCAATAATCCTATCTAAAAAAATTCCAAACTATAAGGAAATAACAAAAAAACTTGGATTTTTATTTCCAATTTATTTGGT
TGGGTTGTATTTTGTTGATACAAATTACTTCATTTCAAATAATGTGTTTTTGTCATCTCTAATCTATGTTGGGGAATTAA
CGCTGATTTCTATTGTAATCTACGCATTAATGGGAGCTGAGGTTTCAGATAAAAAGGCAATAGGTGAGTTAAAAGAGGGA
GATATTCTAAGGGATATTATTGTATTGAAGGATAATGGGGATGTTGTTGTTGAGAATGCCAACTTAATAAAAAGGATAAA
ATTCCTTATAGATTATGAAAAAGGTGGAAAAAAAGATTATAAGTTAATATTTACTGATGGGGAAGGATTATCAGAGGAAA
CTATAAAATTACTCAAAGAACTACATAAGAATGGAAAGATCCCAAATGAACTGAATGTTTTAAAAACTTATCCTTTTATT
CCATTTGTATTTTTAGCATATTTGATCATCCTAATCATTATGTATAAAATGAATGTGGGATATTATGTTATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| eppA | Methanococcus maripaludis strain DSM 2067 |
58.683 |
97.093 |
0.57 |