Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | GPA00_RS03665 | Genome accession | NZ_CP046629 |
| Coordinates | 709695..710651 (+) | Length | 318 a.a. |
| NCBI ID | WP_024344497.1 | Uniprot ID | A0A239RCI2 |
| Organism | Streptococcus equinus strain CNU G6 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 704695..715651
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GPA00_RS03625 (GPA00_03625) | - | 705589..705957 (+) | 369 | WP_094140982.1 | DUF1033 family protein | - |
| GPA00_RS03630 (GPA00_03630) | comYA | 706026..706967 (+) | 942 | WP_027968018.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| GPA00_RS03635 (GPA00_03635) | comYB | 706891..707934 (+) | 1044 | WP_167697815.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| GPA00_RS03640 (GPA00_03640) | comYC | 707934..708236 (+) | 303 | WP_021141433.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| GPA00_RS03645 (GPA00_03645) | comGD | 708211..708651 (+) | 441 | WP_157327520.1 | competence type IV pilus minor pilin ComGD | - |
| GPA00_RS03650 (GPA00_03650) | comYE | 708605..708898 (+) | 294 | WP_074629067.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| GPA00_RS03655 (GPA00_03655) | comYF | 708882..709319 (+) | 438 | WP_157327522.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| GPA00_RS03660 (GPA00_03660) | comGG | 709348..709641 (+) | 294 | WP_268894141.1 | competence type IV pilus minor pilin ComGG | - |
| GPA00_RS03665 (GPA00_03665) | comYH | 709695..710651 (+) | 957 | WP_024344497.1 | class I SAM-dependent methyltransferase | Machinery gene |
| GPA00_RS03670 (GPA00_03670) | - | 710705..711904 (+) | 1200 | WP_045798327.1 | acetate kinase | - |
| GPA00_RS03675 (GPA00_03675) | - | 712062..712259 (+) | 198 | WP_027968026.1 | helix-turn-helix transcriptional regulator | - |
| GPA00_RS03680 (GPA00_03680) | - | 712315..712767 (+) | 453 | WP_074483978.1 | ABC transporter permease | - |
| GPA00_RS03685 (GPA00_03685) | - | 712779..713414 (+) | 636 | WP_141348477.1 | CPBP family intramembrane glutamic endopeptidase | - |
| GPA00_RS03690 (GPA00_03690) | proC | 713466..714236 (-) | 771 | WP_157327526.1 | pyrroline-5-carboxylate reductase | - |
| GPA00_RS03695 (GPA00_03695) | pepA | 714298..715365 (-) | 1068 | WP_074534071.1 | glutamyl aminopeptidase | - |
Sequence
Protein
Download Length: 318 a.a. Molecular weight: 35783.86 Da Isoelectric Point: 4.4780
>NTDB_id=406296 GPA00_RS03665 WP_024344497.1 709695..710651(+) (comYH) [Streptococcus equinus strain CNU G6]
MNFENIETAYGLILENIQLIENELKTHIYDALIEQNSFYLGAEGASEVVAANNEKLRQLNLTKEEWRRAFQFIFIKAAQT
EALQANHQFTPDAIGFILMFLIENLTASKELDVLEIGSGTGNLAQTLLNNSSKDLNYLGIEVDDLLIDLSASIAEVMDSK
AQFVQEDAVRPQILKESDVIISDLPVGFYPNDEIAKRYKVASSEGHTYAHHLLMEQSLKYLKKDGIAVFLAPVSLLTSKQ
SDLLKAWLKDYADVIAVITLPESIFGNAANAKSIFVLKKQAEHTPETFVYPLADLQSREVLTDFIDKFKKWNVENMIF
MNFENIETAYGLILENIQLIENELKTHIYDALIEQNSFYLGAEGASEVVAANNEKLRQLNLTKEEWRRAFQFIFIKAAQT
EALQANHQFTPDAIGFILMFLIENLTASKELDVLEIGSGTGNLAQTLLNNSSKDLNYLGIEVDDLLIDLSASIAEVMDSK
AQFVQEDAVRPQILKESDVIISDLPVGFYPNDEIAKRYKVASSEGHTYAHHLLMEQSLKYLKKDGIAVFLAPVSLLTSKQ
SDLLKAWLKDYADVIAVITLPESIFGNAANAKSIFVLKKQAEHTPETFVYPLADLQSREVLTDFIDKFKKWNVENMIF
Nucleotide
Download Length: 957 bp
>NTDB_id=406296 GPA00_RS03665 WP_024344497.1 709695..710651(+) (comYH) [Streptococcus equinus strain CNU G6]
ATGAATTTTGAAAATATCGAAACAGCCTATGGGTTGATTCTTGAAAATATACAATTAATCGAAAATGAGTTGAAAACACA
CATTTACGATGCACTTATTGAACAAAACTCTTTTTATCTTGGTGCTGAAGGTGCCAGTGAAGTTGTAGCTGCAAATAATG
AGAAACTACGCCAACTTAACTTAACTAAGGAAGAATGGCGCCGTGCTTTTCAGTTTATCTTTATTAAAGCTGCGCAAACA
GAAGCTCTTCAGGCAAATCACCAATTTACACCTGATGCTATTGGCTTCATTTTAATGTTCCTCATTGAGAATTTGACAGC
TTCTAAGGAACTTGATGTTTTGGAAATCGGTAGCGGAACAGGTAACCTTGCTCAAACGTTGTTGAACAACTCATCTAAAG
ACCTAAACTATCTAGGTATTGAAGTTGATGATTTGTTGATTGACTTGTCAGCAAGTATCGCTGAAGTTATGGATTCTAAA
GCTCAATTCGTTCAAGAAGATGCTGTACGCCCACAGATTCTTAAGGAAAGTGATGTCATCATCAGTGACCTTCCAGTCGG
ATTCTATCCAAATGATGAAATTGCAAAACGTTACAAAGTAGCTAGCAGTGAAGGGCACACTTATGCGCATCATTTGTTGA
TGGAACAATCTCTTAAATATCTCAAAAAAGACGGGATTGCTGTCTTTTTAGCACCAGTTAGTCTTTTGACAAGTAAGCAA
AGTGACCTGTTGAAAGCATGGTTGAAGGATTATGCTGATGTGATTGCTGTAATTACTTTGCCAGAATCTATCTTTGGAAA
TGCAGCCAACGCGAAATCAATTTTTGTTTTGAAAAAACAAGCTGAACATACTCCAGAAACCTTTGTTTATCCACTTGCTG
ACTTGCAAAGTCGAGAAGTGTTGACAGACTTCATTGATAAATTTAAAAAATGGAATGTTGAAAATATGATTTTTTAA
ATGAATTTTGAAAATATCGAAACAGCCTATGGGTTGATTCTTGAAAATATACAATTAATCGAAAATGAGTTGAAAACACA
CATTTACGATGCACTTATTGAACAAAACTCTTTTTATCTTGGTGCTGAAGGTGCCAGTGAAGTTGTAGCTGCAAATAATG
AGAAACTACGCCAACTTAACTTAACTAAGGAAGAATGGCGCCGTGCTTTTCAGTTTATCTTTATTAAAGCTGCGCAAACA
GAAGCTCTTCAGGCAAATCACCAATTTACACCTGATGCTATTGGCTTCATTTTAATGTTCCTCATTGAGAATTTGACAGC
TTCTAAGGAACTTGATGTTTTGGAAATCGGTAGCGGAACAGGTAACCTTGCTCAAACGTTGTTGAACAACTCATCTAAAG
ACCTAAACTATCTAGGTATTGAAGTTGATGATTTGTTGATTGACTTGTCAGCAAGTATCGCTGAAGTTATGGATTCTAAA
GCTCAATTCGTTCAAGAAGATGCTGTACGCCCACAGATTCTTAAGGAAAGTGATGTCATCATCAGTGACCTTCCAGTCGG
ATTCTATCCAAATGATGAAATTGCAAAACGTTACAAAGTAGCTAGCAGTGAAGGGCACACTTATGCGCATCATTTGTTGA
TGGAACAATCTCTTAAATATCTCAAAAAAGACGGGATTGCTGTCTTTTTAGCACCAGTTAGTCTTTTGACAAGTAAGCAA
AGTGACCTGTTGAAAGCATGGTTGAAGGATTATGCTGATGTGATTGCTGTAATTACTTTGCCAGAATCTATCTTTGGAAA
TGCAGCCAACGCGAAATCAATTTTTGTTTTGAAAAAACAAGCTGAACATACTCCAGAAACCTTTGTTTATCCACTTGCTG
ACTTGCAAAGTCGAGAAGTGTTGACAGACTTCATTGATAAATTTAAAAAATGGAATGTTGAAAATATGATTTTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
68.987 |
99.371 |
0.686 |
| comYH | Streptococcus mutans UA159 |
68.671 |
99.371 |
0.682 |