Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | GO596_RS02310 | Genome accession | NZ_CP046628 |
| Coordinates | 476347..477303 (-) | Length | 318 a.a. |
| NCBI ID | WP_157339147.1 | Uniprot ID | - |
| Organism | Streptococcus equinus strain CNU 77-23 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 471347..482303
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GO596_RS02280 (GO596_02280) | pepA | 471633..472700 (+) | 1068 | WP_024344502.1 | glutamyl aminopeptidase | - |
| GO596_RS02285 (GO596_02285) | proC | 472762..473532 (+) | 771 | WP_024344501.1 | pyrroline-5-carboxylate reductase | - |
| GO596_RS02290 (GO596_02290) | - | 473584..474219 (-) | 636 | WP_027968028.1 | CPBP family intramembrane glutamic endopeptidase | - |
| GO596_RS02295 (GO596_02295) | - | 474231..474683 (-) | 453 | WP_157339146.1 | ABC transporter permease | - |
| GO596_RS02300 (GO596_02300) | - | 474739..474936 (-) | 198 | WP_027968026.1 | helix-turn-helix transcriptional regulator | - |
| GO596_RS02305 (GO596_02305) | - | 475094..476293 (-) | 1200 | WP_045798327.1 | acetate kinase | - |
| GO596_RS02310 (GO596_02310) | comYH | 476347..477303 (-) | 957 | WP_157339147.1 | class I SAM-dependent methyltransferase | Machinery gene |
| GO596_RS02315 (GO596_02315) | comGG | 477357..477692 (-) | 336 | WP_198362600.1 | competence type IV pilus minor pilin ComGG | - |
| GO596_RS02320 (GO596_02320) | comYF | 477679..478116 (-) | 438 | WP_157339148.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| GO596_RS02325 (GO596_02325) | comYE | 478100..478393 (-) | 294 | WP_157339149.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| GO596_RS02330 (GO596_02330) | comGD | 478347..478787 (-) | 441 | WP_074534076.1 | competence type IV pilus minor pilin ComGD | - |
| GO596_RS02335 (GO596_02335) | comYC | 478762..479064 (-) | 303 | WP_021141433.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| GO596_RS02340 (GO596_02340) | comYB | 479064..480107 (-) | 1044 | WP_198289264.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| GO596_RS02345 (GO596_02345) | comYA | 480031..480972 (-) | 942 | WP_027968018.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| GO596_RS02350 (GO596_02350) | - | 481041..481409 (-) | 369 | WP_021141429.1 | DUF1033 family protein | - |
Sequence
Protein
Download Length: 318 a.a. Molecular weight: 35726.72 Da Isoelectric Point: 4.4001
>NTDB_id=406222 GO596_RS02310 WP_157339147.1 476347..477303(-) (comYH) [Streptococcus equinus strain CNU 77-23]
MNFENIEAAYGLILENIQLIENELKTHIYDALIEQNSFYLGAEGASEAVAANNEELRQLNLTKEEWRRAFQFIFIKAAQT
EALQANHQFTPDAIGFILMFLIENLTASKELDVLEIGSGTGNLAQTLLNNSSKDLNYLGIEVDDLLIDLSASIAEVMDSK
AQFVQEDAVRPQILKESDVIISDLPVGFYPNDEIAKRYKVASSEGHTYAHHLLMEQSLKYLKKDGIAVFLAPVSLLTSKQ
SDLLKAWLKDYADVIAVITLPESIFGNAANAKSIFVLKKQAEHTPETFVYPLADLQSREVLTDFIDKFKKWNVENMIF
MNFENIEAAYGLILENIQLIENELKTHIYDALIEQNSFYLGAEGASEAVAANNEELRQLNLTKEEWRRAFQFIFIKAAQT
EALQANHQFTPDAIGFILMFLIENLTASKELDVLEIGSGTGNLAQTLLNNSSKDLNYLGIEVDDLLIDLSASIAEVMDSK
AQFVQEDAVRPQILKESDVIISDLPVGFYPNDEIAKRYKVASSEGHTYAHHLLMEQSLKYLKKDGIAVFLAPVSLLTSKQ
SDLLKAWLKDYADVIAVITLPESIFGNAANAKSIFVLKKQAEHTPETFVYPLADLQSREVLTDFIDKFKKWNVENMIF
Nucleotide
Download Length: 957 bp
>NTDB_id=406222 GO596_RS02310 WP_157339147.1 476347..477303(-) (comYH) [Streptococcus equinus strain CNU 77-23]
ATGAATTTTGAAAATATCGAAGCAGCCTATGGGTTGATTCTTGAAAATATACAATTAATCGAAAATGAGTTGAAAACACA
CATTTACGATGCACTTATTGAACAAAACTCTTTTTATCTTGGTGCTGAGGGTGCCAGTGAAGCTGTAGCTGCAAATAATG
AGGAACTACGCCAACTTAACTTAACTAAGGAAGAATGGCGCCGTGCTTTTCAGTTTATCTTTATTAAAGCTGCGCAAACA
GAAGCTCTTCAGGCAAATCACCAATTTACACCTGATGCTATTGGCTTCATTTTAATGTTCCTCATTGAGAATTTGACAGC
TTCTAAGGAACTTGATGTTTTGGAAATCGGTAGCGGAACAGGTAACCTTGCCCAAACGTTGTTGAACAACTCATCTAAAG
ACCTAAACTATCTAGGTATTGAAGTTGATGATTTGTTGATTGACTTGTCAGCAAGTATCGCTGAAGTTATGGATTCTAAA
GCTCAATTCGTTCAAGAAGATGCTGTACGCCCACAGATTCTTAAGGAAAGTGATGTCATCATCAGTGACCTTCCAGTCGG
ATTCTATCCAAATGATGAAATTGCAAAACGTTACAAAGTAGCTAGCAGTGAAGGGCACACTTATGCGCATCATTTGTTGA
TGGAACAATCTCTTAAATATCTCAAAAAAGACGGGATTGCTGTCTTTTTAGCACCAGTTAGTCTTTTGACAAGTAAGCAA
AGTGACCTGTTGAAAGCATGGTTGAAGGATTATGCTGATGTGATTGCTGTAATTACTTTGCCAGAATCTATCTTTGGAAA
TGCAGCCAACGCGAAATCAATTTTCGTTTTGAAAAAACAAGCTGAACATACTCCAGAAACCTTTGTTTATCCACTTGCTG
ACTTGCAAAGTCGAGAAGTGTTGACAGACTTCATTGATAAATTTAAAAAATGGAATGTTGAAAATATGATTTTTTAA
ATGAATTTTGAAAATATCGAAGCAGCCTATGGGTTGATTCTTGAAAATATACAATTAATCGAAAATGAGTTGAAAACACA
CATTTACGATGCACTTATTGAACAAAACTCTTTTTATCTTGGTGCTGAGGGTGCCAGTGAAGCTGTAGCTGCAAATAATG
AGGAACTACGCCAACTTAACTTAACTAAGGAAGAATGGCGCCGTGCTTTTCAGTTTATCTTTATTAAAGCTGCGCAAACA
GAAGCTCTTCAGGCAAATCACCAATTTACACCTGATGCTATTGGCTTCATTTTAATGTTCCTCATTGAGAATTTGACAGC
TTCTAAGGAACTTGATGTTTTGGAAATCGGTAGCGGAACAGGTAACCTTGCCCAAACGTTGTTGAACAACTCATCTAAAG
ACCTAAACTATCTAGGTATTGAAGTTGATGATTTGTTGATTGACTTGTCAGCAAGTATCGCTGAAGTTATGGATTCTAAA
GCTCAATTCGTTCAAGAAGATGCTGTACGCCCACAGATTCTTAAGGAAAGTGATGTCATCATCAGTGACCTTCCAGTCGG
ATTCTATCCAAATGATGAAATTGCAAAACGTTACAAAGTAGCTAGCAGTGAAGGGCACACTTATGCGCATCATTTGTTGA
TGGAACAATCTCTTAAATATCTCAAAAAAGACGGGATTGCTGTCTTTTTAGCACCAGTTAGTCTTTTGACAAGTAAGCAA
AGTGACCTGTTGAAAGCATGGTTGAAGGATTATGCTGATGTGATTGCTGTAATTACTTTGCCAGAATCTATCTTTGGAAA
TGCAGCCAACGCGAAATCAATTTTCGTTTTGAAAAAACAAGCTGAACATACTCCAGAAACCTTTGTTTATCCACTTGCTG
ACTTGCAAAGTCGAGAAGTGTTGACAGACTTCATTGATAAATTTAAAAAATGGAATGTTGAAAATATGATTTTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
68.987 |
99.371 |
0.686 |
| comYH | Streptococcus mutans UA159 |
68.671 |
99.371 |
0.682 |