Detailed information NTG0405979

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: GO602_RS26945
• Genome accession: NZ_CP046602
• Coordinates: 5790077..5791141 (-)
• Length: 354 a.a.
• NCBI ID: WP_003110888.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa strain CMC-115
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5785077..5796141

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GO602_RS26920 (GO602_26895)	aroK	5785609..5786127 (-)	519	WP_003095833.1	shikimate kinase AroK	-
GO602_RS26925 (GO602_26900)	pilQ	5786139..5788283 (-)	2145	WP_024916548.1	type 4a pilus secretin PilQ	Machinery gene
GO602_RS26930 (GO602_26905)	pilP	5788337..5788861 (-)	525	WP_003095836.1	type 4a pilus biogenesis lipoprotein PilP	-
GO602_RS26935 (GO602_26910)	pilO	5788858..5789481 (-)	624	WP_024916549.1	type 4a pilus biogenesis protein PilO	-
GO602_RS26940 (GO602_26915)	pilN	5789478..5790077 (-)	600	WP_024916550.1	type 4a pilus biogenesis protein PilN	-
GO602_RS26945 (GO602_26920)	pilM	5790077..5791141 (-)	1065	WP_003110888.1	type IV pilus assembly protein PilM	Machinery gene
GO602_RS26950 (GO602_26925)	-	5791326..5793797 (+)	2472	WP_124129060.1	penicillin-binding protein 1A	-
GO602_RS26955 (GO602_26930)	-	5793893..5795161 (-)	1269	WP_024916552.1	malic enzyme-like NAD(P)-binding protein	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37983.48 Da
• Isoelectric Point: 4.5405

>NTDB_id=405979 GO602_RS26945 WP_003110888.1 5790077..5791141(-) (pilM) [Pseudomonas aeruginosa strain CMC-115]
MLGLIKKKANTLLGIDISSTSVKLLELSRSGGRYKVEAYAVEPLPPNAVVEKNIVELEGVGQALSRVLVKAKTNLKSAVV
AVAGSAVITKTIEMEAGLSEDELENQLKIEADQYIPYPLEEVAIDFEVQGLSARNPERVDVLLAACRKENVEVREAALAL
AGLTAKVVDVEAYALERSYALLSSQLGADTDQLTVAVVDIGATMTTLSVLHNGRTIYTREQLFGGRQLTEEIQRRYGLSV
EEAGLAKKQGGLPDDYDSEVLRPFKDAVVQQVSRSLQFFFAAGQFNDVDYIVLAGGTASIQDLDRLIQQKIGTPTLVANP
FADMALNGKVNAGALASDAPALMIACGLALRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=405979 GO602_RS26945 WP_003110888.1 5790077..5791141(-) (pilM) [Pseudomonas aeruginosa strain CMC-115]
GTGCTAGGGCTCATAAAGAAGAAAGCGAACACCTTGCTGGGGATCGACATCAGCTCGACCTCGGTGAAGCTCCTTGAGTT
GAGCCGCTCCGGAGGCCGCTACAAAGTGGAGGCCTATGCCGTCGAGCCGCTTCCGCCGAATGCAGTCGTGGAAAAGAACA
TCGTCGAGCTGGAAGGGGTCGGCCAGGCGTTGTCACGGGTGCTGGTCAAGGCGAAAACCAACCTGAAGTCGGCCGTGGTC
GCCGTCGCCGGTTCGGCGGTGATTACCAAGACCATCGAGATGGAGGCCGGGCTTTCCGAGGATGAACTGGAAAACCAGCT
GAAGATCGAGGCCGACCAGTACATCCCCTATCCACTGGAGGAAGTCGCCATCGACTTCGAGGTCCAGGGGCTTTCCGCGC
GCAATCCCGAGCGCGTGGACGTGCTCCTGGCCGCCTGTCGGAAAGAGAACGTCGAGGTCCGCGAAGCGGCCCTGGCGCTG
GCCGGACTGACCGCCAAGGTGGTCGACGTCGAGGCCTACGCGCTGGAGCGTTCCTATGCGCTGCTGAGCAGCCAGCTGGG
TGCCGACACCGACCAGTTGACCGTGGCTGTAGTGGACATCGGCGCGACCATGACCACCCTGAGCGTCCTCCACAACGGAC
GCACCATCTATACCCGCGAGCAGCTGTTCGGCGGTCGCCAGCTCACCGAGGAGATCCAGCGGCGTTACGGACTCTCGGTG
GAGGAAGCCGGTCTCGCCAAGAAGCAGGGCGGTCTTCCGGATGACTACGACAGCGAAGTTCTGCGTCCGTTCAAGGACGC
CGTGGTGCAGCAGGTTTCCCGTTCGTTGCAGTTCTTCTTCGCCGCCGGGCAGTTCAACGACGTCGACTACATCGTCCTGG
CCGGCGGTACGGCGTCCATCCAGGATCTCGATCGGTTGATCCAGCAGAAGATCGGCACCCCGACCCTGGTCGCCAACCCG
TTCGCCGACATGGCGCTGAACGGCAAGGTGAATGCCGGCGCCCTGGCCAGCGACGCTCCGGCGTTGATGATCGCCTGTGG
CCTGGCGTTGAGGAGTTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	55.899	100	0.562
comM	Acinetobacter nosocomialis M2	55.899	100	0.562
comM	Acinetobacter baylyi ADP1	51.977	100	0.52
pilM	Legionella pneumophila strain ERS1305867	46.61	100	0.466