Detailed information NTG0040552

Bioinformatically predicted

Overview

• Name: comGD
• Type: Machinery gene
• Locus tag: SSUJS14_RS00810
• Genome accession: NC_017618
• Coordinates: 122036..122443 (+)
• Length: 135 a.a.
• NCBI ID: WP_011921721.1
• Uniprot ID: A0A0H3MT39
• Organism: Streptococcus suis JS14
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 117036..127443

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SSUJS14_RS00785 (SSUJS14_0123)	-	118444..118809 (+)	366	WP_002936568.1	DUF1033 family protein	-
SSUJS14_RS00790 (SSUJS14_0125)	-	118844..119787 (-)	944	Protein_114	S66 peptidase family protein	-
SSUJS14_RS00795 (SSUJS14_0126)	comGA	119873..120823 (+)	951	WP_011921718.1	competence type IV pilus ATPase ComGA	Machinery gene
SSUJS14_RS00800 (SSUJS14_0127)	comGB	120735..121772 (+)	1038	WP_011921719.1	competence type IV pilus assembly protein ComGB	Machinery gene
SSUJS14_RS00805 (SSUJS14_0128)	comGC	121774..122055 (+)	282	WP_011921720.1	competence type IV pilus major pilin ComGC	Machinery gene
SSUJS14_RS00810 (SSUJS14_0129)	comGD	122036..122443 (+)	408	WP_011921721.1	competence type IV pilus minor pilin ComGD	Machinery gene
SSUJS14_RS00815 (SSUJS14_0130)	comGE	122415..122708 (+)	294	WP_011921722.1	competence type IV pilus minor pilin ComGE	Machinery gene
SSUJS14_RS00820 (SSUJS14_0131)	comGF/cglF	122695..123129 (+)	435	WP_011922561.1	competence type IV pilus minor pilin ComGF	Machinery gene
SSUJS14_RS00825 (SSUJS14_0132)	comGG	123107..123517 (+)	411	WP_011921724.1	competence type IV pilus minor pilin ComGG	Machinery gene
SSUJS14_RS00830 (SSUJS14_0133)	comGH	123574..124527 (+)	954	WP_011922562.1	class I SAM-dependent methyltransferase	Machinery gene
SSUJS14_RS00835 (SSUJS14_0134)	-	124577..125764 (+)	1188	WP_012775422.1	acetate kinase	-
SSUJS14_RS00840 (SSUJS14_0136)	-	126079..126630 (+)	552	WP_012774908.1	folate family ECF transporter S component	-

Sequence

Protein

• Length: 135 a.a.
• Molecular weight: 15367.59 Da
• Isoelectric Point: 8.3926

>NTDB_id=40552 SSUJS14_RS00810 WP_011921721.1 122036..122443(+) (comGD) [Streptococcus suis JS14]
MLRRKNKAFTLFESLLTLLVVSFLAVSLSGTVQTVFRSVQEEIFLWEFEAIYKDSQKLAASSHKKVNLAIGGQEVTNGYQ
AVEVPRNVEVLEEKTIQFEEDGGNSSLTKIRFHLSQKIVTYQLYIGSGRYKKTEE

Nucleotide

• Length: 408 bp

>NTDB_id=40552 SSUJS14_RS00810 WP_011921721.1 122036..122443(+) (comGD) [Streptococcus suis JS14]
ATGCTACGGCGAAAAAATAAGGCTTTTACCCTGTTTGAAAGCCTGCTGACCTTGTTGGTTGTCAGTTTTTTAGCTGTTTC
CTTATCAGGAACAGTACAAACGGTCTTTCGGTCTGTTCAGGAAGAAATTTTTCTCTGGGAATTTGAGGCCATCTATAAAG
ACAGTCAGAAATTAGCAGCCAGTTCCCACAAAAAAGTGAACCTTGCTATCGGTGGACAGGAGGTTACAAATGGTTATCAG
GCTGTAGAGGTGCCCAGAAACGTAGAGGTCTTAGAGGAGAAAACTATTCAGTTTGAAGAAGATGGTGGAAATTCTTCTCT
GACCAAGATTCGTTTTCACCTTAGTCAAAAAATAGTCACGTATCAATTATATATAGGGAGTGGTCGCTATAAGAAAACAG
AAGAATAA

Domains

No domain identified.

3D structure

• AlphaFold DB: A0A0H3MT39

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD	Streptococcus gordonii str. Challis substr. CH1	48.031	94.074	0.452
comGD	Streptococcus mutans UA140	46.512	95.556	0.444
comGD	Streptococcus mutans UA159	46.512	95.556	0.444
comGD/cglD	Streptococcus pneumoniae TIGR4	44.961	95.556	0.43
comGD/cglD	Streptococcus pneumoniae R6	44.961	95.556	0.43
comGD/cglD	Streptococcus pneumoniae Rx1	44.961	95.556	0.43
comGD/cglD	Streptococcus pneumoniae D39	44.961	95.556	0.43
comGD/cglD	Streptococcus mitis NCTC 12261	44.186	95.556	0.422
comGD/cglD	Streptococcus mitis SK321	43.411	95.556	0.415
comGD	Lactococcus lactis subsp. cremoris KW2	39.062	94.815	0.37