Detailed information NTG0405072

Bioinformatically predicted

Overview

• Name: comEC/celB
• Type: Machinery gene
• Locus tag: GOM46_RS05055
• Genome accession: NZ_CP046525
• Coordinates: 1009126..1011336 (-)
• Length: 736 a.a.
• NCBI ID: WP_235083305.1
• Uniprot ID: -
• Organism: Streptococcus infantis strain SO
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1004126..1016336

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GOM46_RS05025 (GOM46_05015)	-	1005163..1005699 (-)	537	WP_006150931.1	F0F1 ATP synthase subunit delta	-
GOM46_RS05030 (GOM46_05020)	atpF	1005699..1006193 (-)	495	WP_006150923.1	F0F1 ATP synthase subunit B	-
GOM46_RS05035 (GOM46_05025)	atpB	1006212..1006928 (-)	717	WP_006150950.1	F0F1 ATP synthase subunit A	-
GOM46_RS05040 (GOM46_05030)	-	1006961..1007161 (-)	201	WP_001054554.1	F0F1 ATP synthase subunit C	-
GOM46_RS05045 (GOM46_05035)	-	1007392..1007703 (-)	312	WP_025170042.1	CHY zinc finger protein	-
GOM46_RS05050 (GOM46_05040)	-	1007717..1009003 (-)	1287	WP_006150948.1	peptidase U32 family protein	-
GOM46_RS05055 (GOM46_05045)	comEC/celB	1009126..1011336 (-)	2211	WP_235083305.1	ComEC/Rec2 family competence protein	Machinery gene
GOM46_RS05060 (GOM46_05050)	comEA/celA/cilE	1011320..1011961 (-)	642	WP_006150927.1	helix-hairpin-helix domain-containing protein	Machinery gene
GOM46_RS05065 (GOM46_05055)	-	1012027..1012596 (-)	570	WP_006150922.1	GNAT family N-acetyltransferase	-
GOM46_RS05070 (GOM46_05060)	ald	1012762..1013874 (+)	1113	WP_006150941.1	alanine dehydrogenase	-
GOM46_RS05075 (GOM46_05065)	-	1013921..1014907 (-)	987	WP_025170041.1	PhoH family protein	-
GOM46_RS05080 (GOM46_05070)	-	1014992..1015207 (-)	216	WP_001232087.1	YozE family protein	-
GOM46_RS05085 (GOM46_05075)	cvfB	1015216..1016070 (-)	855	WP_025170040.1	RNA-binding virulence regulatory protein CvfB	-

Sequence

Protein

• Length: 736 a.a.
• Molecular weight: 84800.53 Da
• Isoelectric Point: 9.7348

>NTDB_id=405072 GOM46_RS05055 WP_235083305.1 1009126..1011336(-) (comEC/celB) [Streptococcus infantis strain SO]
MLQWIRRFPIPKIYLSFLLLWLYYAIFSANFLALFGFVFLLVCLFFQFPWKTVTKVLLVCSLFGSWFVFQKWQQEEASQH
LVNTVDTVRILPDTIKVNGDSLSFRGKADGRLFQVYYKLQSEAEKKKFQDLSELHEMAVKGKLASPQGANNFAGFDYRNY
LKTQGIYQTLTISEIVELKQTSSWDIGENLSSLRRKAVVWIKRNFPDPMRNYMTGLLLGHLDTDFEEMNELYSSLGIIHL
FALSGMQVGFFMDAFKKLLLRLGLTQEKFKWLAHPFSLVYAGLTGFSASVIRSLLQKLLAQHGFKSLDNFALTILILFLI
MPNFFLTAGGVLSCAYAFILTMTGEEVAGIKGLVRESCIISLGILPILSFYFSEFQPWSILLTFFFSFLFDMVLLPLLSI
LFCLSFIYPITQFNFLFEWLENIIRYISQLSTRPLVFGQPSLWILILFLIILALIYDYRKNLKKISMLVIVAISLFLVTK
HPLENEITVLDMEQGRSIFLRDMTGKTILLDVGEKSERDKKEAWQERISSSNAERSLIPYLKSRGVAKIDQLVLTTSEPK
QLDHVLEMSKSFELEEILVSEETLSKREFMDKLKKSKIKVATIKTGQQLFIFGSSLEAFTSQNGDKKDSMVLYGKLLNQT
FLVTGNLEEKFLTKSYPKLQADIVITHQQASKKKTDVEVFKNLQPKTTVISVDKKKKFKEKNEESNQELGNSIYKTDQKG
AIRFKGWSTWRIETVR

Nucleotide

• Length: 2211 bp

>NTDB_id=405072 GOM46_RS05055 WP_235083305.1 1009126..1011336(-) (comEC/celB) [Streptococcus infantis strain SO]
ATGTTACAGTGGATTAGACGCTTTCCCATTCCAAAAATCTATCTCAGTTTTCTTTTGCTATGGCTCTACTATGCAATCTT
TTCAGCAAATTTCTTAGCACTTTTTGGCTTTGTCTTTTTACTAGTCTGCCTTTTTTTCCAATTTCCATGGAAGACTGTGA
CCAAAGTCCTATTGGTTTGCAGCCTATTTGGGAGTTGGTTTGTATTTCAAAAATGGCAGCAAGAAGAAGCGAGCCAACAT
CTAGTCAACACGGTTGATACAGTTCGAATCTTGCCTGATACCATCAAGGTTAATGGTGATAGCTTGTCTTTTCGTGGCAA
GGCTGATGGTAGACTCTTTCAGGTCTATTATAAGCTCCAGTCAGAAGCCGAAAAGAAAAAATTTCAAGACTTATCTGAAC
TACATGAAATGGCTGTGAAAGGCAAGTTAGCTAGTCCTCAAGGGGCAAACAATTTTGCTGGTTTTGATTATCGAAACTAT
CTCAAAACGCAAGGAATCTATCAGACCTTAACTATATCCGAAATTGTTGAGCTAAAGCAAACAAGTAGTTGGGATATCGG
AGAAAATCTATCAAGCTTGAGGAGAAAAGCAGTTGTCTGGATTAAACGGAATTTTCCCGATCCCATGCGCAACTATATGA
CCGGTCTTTTATTGGGTCATTTAGATACGGACTTTGAGGAAATGAATGAACTCTACTCGAGTCTGGGGATTATTCACCTT
TTTGCTTTATCTGGAATGCAAGTCGGATTTTTCATGGATGCTTTCAAAAAGTTACTTCTGCGTTTGGGTTTGACGCAAGA
GAAGTTCAAATGGTTAGCCCACCCCTTCTCCTTAGTCTATGCAGGTTTGACAGGATTTTCAGCCTCTGTTATTCGTAGTC
TTCTACAAAAGCTATTGGCTCAGCATGGCTTTAAGTCACTGGATAATTTTGCTTTAACGATTCTTATTCTATTTCTTATC
ATGCCGAACTTTTTCTTAACTGCTGGGGGAGTTCTTTCCTGTGCTTATGCCTTTATCCTGACCATGACTGGTGAGGAAGT
AGCAGGGATAAAAGGTCTGGTTAGAGAGAGTTGCATTATTTCCTTGGGAATTCTGCCAATTTTATCATTTTATTTTTCAG
AATTTCAACCGTGGTCCATTCTCTTGACATTTTTCTTTTCATTCTTATTTGATATGGTCCTGTTACCGCTCTTATCGATT
CTCTTCTGTCTGTCATTTATATATCCCATCACCCAGTTCAACTTTCTCTTTGAATGGCTTGAAAACATCATTCGCTATAT
TTCTCAGCTATCTACGAGGCCTCTTGTTTTTGGTCAGCCGAGTCTTTGGATTTTAATCCTTTTTTTGATTATTTTAGCTC
TCATCTACGATTATCGAAAGAATTTGAAAAAAATATCTATGCTTGTCATAGTTGCTATCTCGCTCTTTTTAGTAACCAAA
CATCCACTGGAGAATGAAATCACAGTCCTAGATATGGAACAGGGGCGGAGCATTTTCCTAAGAGACATGACAGGAAAGAC
CATACTACTGGATGTCGGAGAAAAATCTGAACGTGACAAGAAAGAAGCCTGGCAGGAGAGGATTTCCTCTAGCAATGCCG
AACGGAGTTTAATCCCTTATCTAAAAAGTCGAGGAGTTGCAAAGATTGATCAGCTTGTGCTAACGACTAGTGAACCTAAG
CAACTAGACCATGTGTTAGAAATGAGTAAATCCTTCGAGCTTGAAGAGATTCTAGTAAGTGAAGAAACTTTATCTAAAAG
AGAATTTATGGATAAGCTGAAGAAAAGCAAAATCAAGGTAGCTACTATTAAAACAGGGCAGCAGTTGTTTATTTTTGGCA
GTAGTTTGGAAGCATTCACTAGCCAAAATGGCGATAAAAAGGATTCAATGGTCTTGTATGGAAAGTTACTAAACCAAACC
TTTCTAGTTACTGGAAATTTAGAGGAAAAGTTCTTAACCAAGTCTTATCCGAAACTCCAAGCAGATATTGTGATAACTCA
TCAGCAAGCATCGAAGAAAAAGACAGATGTAGAAGTCTTCAAAAACTTACAACCTAAAACCACTGTCATTTCGGTAGACA
AGAAGAAAAAATTCAAAGAAAAAAATGAGGAAAGTAACCAAGAACTTGGGAATTCGATTTATAAAACGGACCAAAAGGGT
GCCATTCGTTTCAAAGGTTGGAGTACTTGGCGAATAGAAACAGTTCGCTGA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (216-459)

• Domain of unknown function (DUF4131) (DUF4131) (30-176)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC/celB	Streptococcus mitis SK321	66.756	100	0.677
comEC/celB	Streptococcus mitis NCTC 12261	66.577	100	0.674
comEC/celB	Streptococcus pneumoniae Rx1	66.354	100	0.673
comEC/celB	Streptococcus pneumoniae D39	66.354	100	0.673
comEC/celB	Streptococcus pneumoniae R6	66.354	100	0.673
comEC/celB	Streptococcus pneumoniae TIGR4	65.818	100	0.667
comEC	Lactococcus lactis subsp. cremoris KW2	40.27	100	0.405