Detailed information NTG0405047

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: GOM46_RS01380
• Genome accession: NZ_CP046525
• Coordinates: 271681..272748 (+)
• Length: 355 a.a.
• NCBI ID: WP_006150205.1
• Uniprot ID: F5VZ48
• Organism: Streptococcus infantis strain SO
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 266681..277748

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GOM46_RS01365 (GOM46_01350)	amiA	267205..269184 (+)	1980	WP_006150231.1	peptide ABC transporter substrate-binding protein	Regulator
GOM46_RS01370 (GOM46_01355)	amiC	269250..270746 (+)	1497	WP_178895474.1	ABC transporter permease	Regulator
GOM46_RS01375 (GOM46_01360)	amiD	270746..271672 (+)	927	WP_006150281.1	oligopeptide ABC transporter permease OppC	Regulator
GOM46_RS01380 (GOM46_01365)	amiE	271681..272748 (+)	1068	WP_006150205.1	ABC transporter ATP-binding protein	Regulator
GOM46_RS01385 (GOM46_01370)	amiF	272759..273685 (+)	927	WP_006150242.1	ATP-binding cassette domain-containing protein	Regulator
GOM46_RS01390 (GOM46_01375)	-	273840..274040 (+)	201	WP_006150329.1	hypothetical protein	-
GOM46_RS01395 (GOM46_01380)	-	274387..276786 (-)	2400	Protein_251	glycosyl hydrolase family 95 catalytic domain-containing protein	-
GOM46_RS01400 (GOM46_01385)	-	277070..277315 (+)	246	WP_004251708.1	YneF family protein	-

Sequence

Protein

• Length: 355 a.a.
• Molecular weight: 39643.26 Da
• Isoelectric Point: 4.6029

>NTDB_id=405047 GOM46_RS01380 WP_006150205.1 271681..272748(+) (amiE) [Streptococcus infantis strain SO]
MTKEKNVILTAQDIVVEFDVRDKILTAIRGVSLELIEGEVLALVGESGSGKSVLTKTFTGMLEDNGRIANGSILYRDQDL
TEFSSHKDWEQIRGAKIATIFQDPMTSLDPIKTIGSQITEVIVKHQGKTAQEAKDLAIDYMNKVGIPDAERRFNEYPFQY
SGGMRQRIVIAIALACRPDVLICDEPTTALDVTIQAQIIDLLKTLQQEYHFTTIFITHDLGVVASIADKVAVMYAGEIVE
YGTVEEIFYDPRHPYTWSLLSSLPQLADDKGELYSIPGTPPSLYTELKGDAFALRSDYAMKIDFEEKAPQFAVSDTHWAK
TWLLDEQAPKVAKPAVIADLHDKIREKMGFAHLED

Nucleotide

• Length: 1068 bp

>NTDB_id=405047 GOM46_RS01380 WP_006150205.1 271681..272748(+) (amiE) [Streptococcus infantis strain SO]
ATGACAAAAGAAAAAAATGTAATTTTGACTGCTCAAGATATTGTCGTGGAATTTGATGTTCGTGACAAAATTTTGACAGC
TATTCGTGGAGTATCTCTGGAGTTGATTGAGGGCGAAGTGCTTGCACTCGTTGGAGAATCTGGTTCAGGGAAATCTGTTT
TAACAAAAACTTTTACAGGAATGTTGGAAGATAATGGTCGTATTGCGAACGGTAGTATTCTTTACCGTGACCAAGATTTG
ACTGAATTTTCTTCTCATAAAGATTGGGAGCAAATTCGTGGTGCGAAGATTGCAACGATCTTCCAGGACCCGATGACCAG
TCTTGACCCAATCAAAACAATCGGAAGTCAAATCACAGAAGTTATTGTGAAACACCAAGGGAAAACGGCTCAAGAAGCAA
AAGACTTGGCGATTGACTATATGAATAAGGTTGGTATCCCTGACGCTGAGAGACGTTTTAATGAATATCCATTCCAGTAT
TCTGGTGGGATGCGTCAACGTATTGTTATTGCGATTGCCCTTGCCTGTCGTCCAGATGTTTTGATTTGTGATGAACCAAC
AACAGCCCTTGATGTGACCATCCAAGCTCAGATTATTGACTTGTTGAAAACACTTCAACAAGAATACCACTTTACAACTA
TCTTTATCACACACGACCTTGGTGTTGTAGCAAGTATTGCTGATAAAGTTGCAGTTATGTATGCTGGTGAAATCGTTGAG
TATGGTACAGTTGAAGAAATCTTCTACGATCCACGTCACCCATACACATGGAGCCTCTTATCAAGTTTGCCACAGCTGGC
TGACGATAAAGGAGAATTGTATTCAATTCCGGGAACACCTCCATCACTGTATACTGAATTGAAGGGAGATGCTTTTGCTC
TTCGTTCAGATTATGCGATGAAGATTGATTTCGAAGAAAAAGCTCCTCAGTTTGCAGTATCTGATACTCACTGGGCTAAA
ACATGGTTGCTTGATGAACAAGCTCCAAAAGTTGCAAAACCAGCAGTAATTGCAGATTTACACGATAAGATTCGTGAAAA
GATGGGCTTTGCTCATCTTGAGGACTAG

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (239-301)

• ABC transporter (ABC_tran) (29-187)

3D structure

• AlphaFold DB: F5VZ48

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	85.634	100	0.856
amiE	Streptococcus thermophilus LMG 18311	84.507	100	0.845
amiE	Streptococcus thermophilus LMD-9	84.507	100	0.845
oppD	Streptococcus mutans UA159	54.261	99.155	0.538