Detailed information    

insolico Bioinformatically predicted

Overview

Name   stkP   Type   Regulator
Locus tag   GOM47_RS07615 Genome accession   NZ_CP046524
Coordinates   1503708..1505591 (-) Length   627 a.a.
NCBI ID   WP_235080409.1    Uniprot ID   -
Organism   Streptococcus oralis strain SOT     
Function   require for competence development; phosphorylate ComE (predicted from homology)   
Competence regulation

Genomic Context

Location: 1498708..1510591
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GOM47_RS07590 (GOM47_07585) - 1498839..1499804 (+) 966 WP_235080405.1 LacI family DNA-binding transcriptional regulator -
  GOM47_RS07595 (GOM47_07590) - 1499840..1501114 (-) 1275 WP_235080406.1 hydroxymethylglutaryl-CoA reductase, degradative -
  GOM47_RS07600 (GOM47_07595) - 1501114..1502286 (-) 1173 WP_235080407.1 hydroxymethylglutaryl-CoA synthase -
  GOM47_RS07605 (GOM47_07600) - 1502405..1502860 (-) 456 WP_235080408.1 threonine/serine exporter family protein -
  GOM47_RS07610 (GOM47_07605) - 1502862..1503620 (-) 759 WP_000344542.1 threonine/serine exporter family protein -
  GOM47_RS07615 (GOM47_07610) stkP 1503708..1505591 (-) 1884 WP_235080409.1 Stk1 family PASTA domain-containing Ser/Thr kinase Regulator
  GOM47_RS07620 (GOM47_07615) - 1505588..1506328 (-) 741 WP_235080410.1 Stp1/IreP family PP2C-type Ser/Thr phosphatase -
  GOM47_RS07625 (GOM47_07620) rsmB 1506344..1507657 (-) 1314 WP_235080411.1 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB -
  GOM47_RS07630 (GOM47_07625) fmt 1507650..1508585 (-) 936 WP_000163667.1 methionyl-tRNA formyltransferase -

Sequence

Protein


Download         Length: 627 a.a.        Molecular weight: 68301.58 Da        Isoelectric Point: 9.0566

>NTDB_id=405003 GOM47_RS07615 WP_235080409.1 1503708..1505591(-) (stkP) [Streptococcus oralis strain SOT]
MIQIGKIFAGRYRIVKQIGRGGMADVYLAKDLILDGEEVAVKVLRTNYQTDPIAVARFQREARAMADLDHPHIVRITDIG
EEDGQQYLAMEYVAGLDLKRYIKEHSPLSNEEAVRIMGQILLAMRLAHTRGIIHRDLKPQNILLTPDGTAKVTDFGIAVA
FAETSLTQTNSMLGSVHYLSPEQARGSKATVQSDIYAMGIIFYEMLTGHIPYDGDSAVTIALQHFQKPLPSVIAENPAVP
QALENVVIKATAKKLTDRYQSVSEMYVDLSSCLSHNRRREPKLVFDEASKVDTKTLPKVPQSTLTSIPKAKPQLERPQSK
QQTQQVVDEAPVPKPAKKRKFKARYMILLASALLVAASLIWIFSRTPANIAIPNVSGQTVAEAKEALKKANFEVGEEKTE
ASDTVAEGRIIRTDPEAGSSRKEGSKVNLIVSSGKQSFQLSNYVGRKSSDVVAELKEKKVPENLIKIEEEESSESDPGTV
IRQTPAAGSTYDLTKATSIVLTVAKKVTSVSMPSYIGSSLEFTKNNLTQIVGVKEANIEVVEVSTAPEGTAEGTVVDQTP
KAGEKVDLNKTRVKISIYKPKPLPSSSSSSQHGNSGTDTTPSQSNNQGSNPTTDSSDGSRTSSNERN

Nucleotide


Download         Length: 1884 bp        

>NTDB_id=405003 GOM47_RS07615 WP_235080409.1 1503708..1505591(-) (stkP) [Streptococcus oralis strain SOT]
ATGATCCAGATCGGCAAGATTTTTGCCGGACGATATCGGATTGTCAAACAGATTGGTCGAGGAGGCATGGCGGATGTTTA
CTTGGCCAAGGATTTGATCCTAGACGGGGAAGAAGTGGCGGTTAAGGTTCTGAGGACTAACTATCAGACAGATCCGATTG
CTGTGGCACGTTTTCAACGTGAAGCGAGAGCCATGGCGGATCTGGATCATCCCCATATCGTTCGGATAACAGATATCGGT
GAGGAAGACGGTCAGCAGTATCTAGCTATGGAGTATGTGGCAGGGCTTGACCTCAAACGTTATATCAAAGAACACTCCCC
TCTCTCAAATGAAGAAGCCGTCCGTATTATGGGACAGATTCTCTTGGCGATGCGTCTGGCGCATACGAGAGGGATTATCC
ACCGAGATTTGAAACCTCAAAATATCCTATTGACACCAGATGGAACTGCCAAAGTTACAGACTTTGGGATTGCCGTGGCT
TTTGCAGAGACCAGTCTGACACAGACCAACTCCATGCTCGGTTCAGTCCACTATCTCTCACCTGAGCAGGCCCGTGGTTC
CAAGGCAACTGTGCAGAGTGACATCTATGCTATGGGGATTATTTTCTATGAAATGTTGACTGGACATATCCCTTATGATG
GGGATAGTGCAGTGACTATTGCCCTCCAGCATTTCCAAAAACCACTTCCATCTGTTATTGCTGAGAATCCAGCAGTACCA
CAAGCTTTGGAAAATGTCGTTATCAAGGCAACGGCCAAGAAATTGACAGATCGCTATCAGTCTGTATCAGAAATGTATGT
GGACTTGTCAAGTTGTTTGTCTCACAATCGTAGGAGAGAACCAAAGCTAGTCTTTGATGAGGCAAGCAAGGTTGATACCA
AGACCTTGCCTAAAGTTCCACAAAGCACTCTAACCTCTATTCCGAAGGCTAAGCCACAATTAGAGCGACCTCAATCAAAA
CAGCAGACTCAGCAGGTGGTAGATGAAGCACCAGTACCAAAACCAGCGAAAAAACGGAAGTTTAAAGCTCGCTACATGAT
TTTACTGGCCAGTGCCTTGCTAGTTGCAGCCTCTTTGATTTGGATCTTCTCCCGAACTCCAGCGAATATTGCTATTCCAA
ATGTATCGGGACAGACAGTTGCTGAAGCTAAAGAAGCCCTTAAAAAAGCCAATTTTGAAGTAGGTGAAGAAAAGACAGAG
GCCAGCGACACAGTAGCTGAAGGTCGCATTATTCGAACAGACCCAGAAGCTGGAAGCAGTCGAAAAGAAGGAAGCAAAGT
AAATCTAATCGTTTCATCAGGTAAGCAATCCTTCCAACTAAGTAACTATGTAGGACGTAAGTCCTCGGATGTTGTCGCAG
AGCTCAAAGAGAAAAAGGTTCCAGAAAATCTTATCAAGATCGAGGAAGAGGAATCTAGCGAAAGCGATCCAGGAACAGTC
ATTAGGCAAACCCCAGCTGCAGGAAGTACTTACGACCTAACAAAGGCAACAAGTATTGTATTGACAGTTGCTAAGAAGGT
GACCAGCGTTTCGATGCCAAGTTACATTGGTTCAAGTCTCGAGTTTACAAAGAATAACTTGACTCAGATTGTTGGTGTAA
AAGAGGCTAATATTGAGGTTGTTGAAGTATCGACAGCTCCTGAAGGAACAGCAGAGGGCACGGTTGTAGATCAAACACCA
AAAGCTGGAGAAAAGGTAGATCTCAATAAAACACGTGTTAAGATTTCTATTTATAAACCAAAACCACTTCCTTCTTCATC
AAGTTCGTCTCAACACGGAAATTCAGGAACAGACACGACGCCTTCACAGAGTAACAATCAAGGTAGCAACCCTACAACGG
ATTCTTCAGATGGCAGTAGAACGTCAAGCAATGAACGAAATTAA

Domains

Predicted by InterproScan.

Protein kinase domain (Pkinase)

(12-227)

PASTA domain (PASTA)

(371-432)

PASTA domain (PASTA)

(441-505)

PASTA domain (PASTA)

(510-579)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  stkP Streptococcus pneumoniae TIGR4

77.702

92.982

0.722
  stkP Streptococcus pneumoniae D39

77.358

92.982

0.719
  stkP Streptococcus pneumoniae R6

77.358

92.982

0.719
  stkP Streptococcus pneumoniae Rx1

77.187

92.982

0.718
  pknB Streptococcus mutans UA159

55.766

92.663

0.517
  stkP/pknB Streptococcus salivarius strain HSISS4

51.864

94.099

0.488

Multiple sequence alignment