Detailed information NTG0404935

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: GOM48_RS08310
• Genome accession: NZ_CP046523
• Coordinates: 1653846..1654913 (-)
• Length: 355 a.a.
• NCBI ID: WP_000159698.1
• Uniprot ID: A0A7T2ZNC5
• Organism: Streptococcus oralis strain SOD
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1648846..1659913

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GOM48_RS08290 (GOM48_08230)	-	1649120..1649623 (-)	504	WP_235097116.1	tRNA (cytidine(34)-2'-O)-methyltransferase	-
GOM48_RS08295 (GOM48_08235)	trkA	1650026..1651375 (+)	1350	WP_235097117.1	Trk system potassium transporter TrkA	-
GOM48_RS08300 (GOM48_08240)	-	1651379..1652818 (+)	1440	WP_235097118.1	TrkH family potassium uptake protein	-
GOM48_RS08305 (GOM48_08245)	amiF	1652906..1653835 (-)	930	WP_001291316.1	ATP-binding cassette domain-containing protein	Regulator
GOM48_RS08310 (GOM48_08250)	amiE	1653846..1654913 (-)	1068	WP_000159698.1	ABC transporter ATP-binding protein	Regulator
GOM48_RS08315 (GOM48_08255)	amiD	1654922..1655848 (-)	927	WP_000103934.1	oligopeptide ABC transporter permease OppC	Regulator
GOM48_RS08320 (GOM48_08260)	amiC	1655848..1657344 (-)	1497	WP_000759921.1	ABC transporter permease	Regulator
GOM48_RS08325 (GOM48_08265)	amiA	1657411..1659390 (-)	1980	WP_000749717.1	peptide ABC transporter substrate-binding protein	Regulator

Sequence

Protein

• Length: 355 a.a.
• Molecular weight: 39557.18 Da
• Isoelectric Point: 4.6533

>NTDB_id=404935 GOM48_RS08310 WP_000159698.1 1653846..1654913(-) (amiE) [Streptococcus oralis strain SOD]
MTKENNVILTARDIVVEFDVRDKVLTAIRGVSLDLIEGEVLALVGESGSGKSVLTKTFTGMLEDNGRIAQGSIDYRGQDL
TALTSNKEWEKIRGAKIATIFQDPMTSLDPINTIGSQITEVIVKHQGKTAKEAKEMAIDYMNKVGIPDAEKRFDEYPFQY
SGGMRQRIVIAIALACRPDILICDEPTTALDVTIQAQIIDLLKTLQNEYHFTIIFITHDLGVVASIADKVAVMYAGEIVE
YGTVEEVFYDPRHPYTWSLLSSLPQLADDKGELYSIPGTPPSLYTELKGDAFALRSDYAMQIDFEEKAPKFSVTDTHWAK
TWLLHENAPKVEKPGVIADLHDKIRDKMGFAHLED

Nucleotide

• Length: 1068 bp

>NTDB_id=404935 GOM48_RS08310 WP_000159698.1 1653846..1654913(-) (amiE) [Streptococcus oralis strain SOD]
ATGACAAAAGAAAATAATGTAATTTTGACTGCTCGTGATATTGTCGTGGAATTTGACGTTCGTGACAAAGTTCTGACGGC
TATCCGAGGAGTTTCTCTGGACCTGATTGAGGGAGAAGTTCTTGCATTGGTAGGTGAGTCTGGTTCTGGTAAATCTGTTT
TAACAAAAACCTTTACAGGGATGTTAGAAGACAATGGACGTATTGCCCAAGGAAGTATCGACTATCGTGGACAAGACTTG
ACTGCTCTTACTTCTAACAAGGAATGGGAGAAGATTCGTGGTGCTAAAATTGCGACCATCTTCCAAGACCCTATGACAAG
TTTGGACCCAATCAATACAATCGGTAGCCAAATCACTGAAGTTATTGTTAAACATCAAGGGAAAACAGCTAAGGAAGCCA
AAGAGATGGCAATCGACTATATGAACAAGGTCGGAATTCCAGACGCTGAAAAACGTTTTGACGAGTATCCTTTCCAATAT
TCTGGAGGGATGCGCCAACGTATCGTTATTGCAATTGCCCTTGCCTGTCGTCCAGATATCTTGATCTGTGACGAGCCAAC
AACGGCCCTTGACGTTACCATTCAAGCGCAAATCATTGATTTGCTTAAAACCTTGCAAAATGAGTACCACTTTACCATTA
TCTTTATCACCCATGACCTTGGTGTGGTAGCAAGTATTGCCGATAAGGTAGCGGTTATGTATGCTGGTGAAATTGTAGAA
TACGGTACTGTTGAGGAAGTCTTCTACGATCCACGTCATCCATATACTTGGAGTCTCTTGTCTAGCTTGCCTCAGCTTGC
TGATGATAAAGGAGAATTGTACTCTATCCCGGGAACACCACCGTCTCTTTATACTGAGTTGAAAGGTGATGCTTTTGCCC
TTCGTTCAGATTATGCGATGCAAATTGATTTTGAAGAGAAGGCACCTAAGTTTTCAGTCACTGATACCCACTGGGCTAAG
ACTTGGTTGCTTCATGAGAATGCTCCTAAAGTTGAAAAACCTGGAGTCATTGCAGATTTGCATGACAAGATTCGTGATAA
AATGGGCTTTGCTCATCTAGAAGACTAG

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (29-187)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (239-301)

3D structure

• AlphaFold DB: A0A7T2ZNC5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	86.197	100	0.862
amiE	Streptococcus thermophilus LMG 18311	84.225	100	0.842
amiE	Streptococcus thermophilus LMD-9	84.225	100	0.842
oppD	Streptococcus mutans UA159	54.545	99.155	0.541