Detailed information NTG0404279

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: GMO17_RS01610
• Genome accession: NZ_CP046441
• Coordinates: 349695..350759 (+)
• Length: 354 a.a.
• NCBI ID: WP_191892739.1
• Uniprot ID: A0AAE6UJZ3
• Organism: Pseudomonas coronafaciens pv. coronafaciens strain B19001
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 344695..355759

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GMO17_RS01600 (GMO17_01670)	-	345612..346880 (+)	1269	WP_005888200.1	malic enzyme-like NAD(P)-binding protein	-
GMO17_RS01605 (GMO17_01680)	-	347043..349484 (-)	2442	WP_371903650.1	penicillin-binding protein 1A	-
GMO17_RS01610 (GMO17_01685)	pilM	349695..350759 (+)	1065	WP_191892739.1	pilus assembly protein PilM	Machinery gene
GMO17_RS01615 (GMO17_01690)	-	350759..351334 (+)	576	WP_005888206.1	PilN domain-containing protein	-
GMO17_RS01620 (GMO17_01695)	pilO	351331..351954 (+)	624	WP_005888208.1	type 4a pilus biogenesis protein PilO	-
GMO17_RS01625 (GMO17_01700)	pilP	351951..352478 (+)	528	WP_005888210.1	type 4a pilus biogenesis lipoprotein PilP	-
GMO17_RS01630 (GMO17_01705)	pilQ	352526..354631 (+)	2106	WP_005888212.1	type IV pilus secretin PilQ	Machinery gene
GMO17_RS01635 (GMO17_01710)	aroK	354636..355154 (+)	519	WP_005888214.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 38130.69 Da
• Isoelectric Point: 4.7688

>NTDB_id=404279 GMO17_RS01610 WP_191892739.1 349695..350759(+) (pilM) [Pseudomonas coronafaciens pv. coronafaciens strain B19001]
MFELFKKKANTLLGIDISSTSVKLLELSRSGTRYKVESYAVEPLPANAVVEKNIAELEGVGQALSRVLAKAKTSVKIVAV
AVAGSAVITKTIEMDAGLSDDDMENQLKLEADQYIPYPLEEVAIDFEVQGYSVRNPERVEVLLAACRKENVEVREAALAL
AGLTARVVDVEAYALERSFGLLAAQLGNGHDELTVAVVDIGATMTTLSVLHHGRIIYTREQLFGGRQLTDEIQRRYGLSM
EEAGLAKKQGGLPDDYVSEVLDPFKDALVQQVSRSLQFFFAAGQYNSVDHIMLAGGTASISGLEHLIQRRIGTPTMVANP
FADMALSAKVNAGALASDAPALMIACGLALRNFD

Nucleotide

• Length: 1065 bp

>NTDB_id=404279 GMO17_RS01610 WP_191892739.1 349695..350759(+) (pilM) [Pseudomonas coronafaciens pv. coronafaciens strain B19001]
GTGTTCGAACTCTTCAAGAAGAAGGCCAACACCCTTCTAGGGATCGATATTAGCTCCACCTCGGTAAAACTCCTGGAATT
GAGTCGTTCCGGCACTCGTTACAAGGTCGAGTCTTACGCAGTCGAGCCGTTGCCGGCCAACGCTGTGGTCGAAAAAAATA
TTGCCGAACTCGAAGGGGTGGGTCAGGCGCTGTCTCGCGTGCTTGCCAAGGCCAAGACCAGCGTCAAGATTGTGGCGGTG
GCCGTTGCCGGGTCCGCCGTTATTACCAAGACCATCGAGATGGACGCCGGTCTTTCCGACGACGACATGGAAAACCAGCT
CAAGCTTGAAGCTGATCAGTACATTCCCTATCCGCTTGAAGAAGTCGCCATCGATTTTGAGGTGCAGGGCTATTCGGTCC
GCAACCCGGAACGCGTCGAGGTCCTTCTGGCGGCCTGCCGCAAGGAAAACGTCGAAGTGCGCGAGGCTGCGCTGGCGCTG
GCCGGTCTGACCGCGCGTGTCGTCGATGTCGAAGCCTATGCGCTGGAGCGTTCGTTCGGCCTGCTGGCCGCGCAACTGGG
CAACGGTCATGACGAGCTTACCGTGGCGGTGGTTGATATCGGCGCCACGATGACCACCTTGAGCGTGCTGCACCATGGCC
GGATAATCTATACCCGCGAACAACTGTTCGGTGGTCGCCAGCTGACTGACGAAATTCAGCGCCGTTACGGGCTCTCGATG
GAGGAAGCCGGGCTTGCCAAAAAGCAGGGCGGGCTGCCCGACGACTACGTCAGCGAAGTGCTGGACCCGTTCAAGGATGC
ATTGGTGCAGCAGGTTTCCCGTTCTCTGCAGTTCTTTTTTGCGGCAGGTCAGTACAACTCAGTGGATCACATCATGCTGG
CAGGCGGCACGGCTTCAATCTCCGGGCTGGAGCATCTTATTCAGCGGCGCATTGGTACGCCGACTATGGTGGCCAACCCG
TTTGCCGACATGGCTTTGAGCGCCAAGGTCAATGCTGGCGCCCTGGCGAGTGATGCGCCTGCCTTGATGATCGCGTGCGG
TCTGGCGTTGAGGAACTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	55.932	100	0.559
comM	Acinetobacter nosocomialis M2	55.932	100	0.559
comM	Acinetobacter baylyi ADP1	53.39	100	0.534
pilM	Legionella pneumophila strain ERS1305867	47.042	100	0.472