Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   SOR_RS09710 Genome accession   NC_015291
Coordinates   1957720..1958478 (+) Length   252 a.a.
NCBI ID   WP_000410359.1    Uniprot ID   A0A1X1GXY0
Organism   Streptococcus oralis Uo5     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1952720..1963478
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SOR_RS09680 (SOR_1984) comE 1953311..1954057 (-) 747 WP_000866078.1 competence system response regulator transcription factor ComE Regulator
  SOR_RS09685 (SOR_1985) comD 1954054..1955373 (-) 1320 WP_000362884.1 competence system sensor histidine kinase ComD Regulator
  SOR_RS09690 (SOR_1986) comC/comC2 1955394..1955519 (-) 126 WP_000799678.1 competence-stimulating peptide ComC Regulator
  SOR_RS09700 (SOR_1989) rlmH 1955801..1956280 (-) 480 WP_000694219.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  SOR_RS09705 (SOR_1990) htrA 1956466..1957662 (+) 1197 WP_000681803.1 S1C family serine protease Regulator
  SOR_RS09710 (SOR_1991) spo0J 1957720..1958478 (+) 759 WP_000410359.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 252 a.a.        Molecular weight: 29037.54 Da        Isoelectric Point: 8.2829

>NTDB_id=40233 SOR_RS09710 WP_000410359.1 1957720..1958478(+) (spo0J) [Streptococcus oralis Uo5]
MEKFEMISISEIQKNPYQPRKEFDVEKLKELAQSIKENGLIQPIIVRQSPVIGYEILAGERRYRASLLAGLTSIPAVVKH
LSDQEMMIQSIIENLQRENLNPVEEARAYESLVEKGFTHTDIADKMGKSRPYITNFIRLLSLPEYILAEVENGKISQAHA
RSLVGLDKEQQDYFFQLIKNEDISVRKLEALLTEKKHKKQKKSDSFIKDEEDKLKKILGLSVEIKLSKKDTGKIIISFSS
QEEYDRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=40233 SOR_RS09710 WP_000410359.1 1957720..1958478(+) (spo0J) [Streptococcus oralis Uo5]
ATGGAAAAATTTGAAATGATTTCTATCTCTGAAATACAAAAGAATCCTTACCAACCTCGGAAAGAATTTGATGTAGAAAA
ATTAAAAGAATTAGCTCAGTCAATCAAAGAAAATGGGCTCATCCAACCAATCATCGTTCGTCAATCTCCTGTAATTGGTT
ATGAAATCCTTGCAGGAGAGAGACGATATCGGGCTTCTCTCTTGGCTGGTCTAACCTCTATTCCAGCCGTTGTAAAGCAC
CTCTCAGATCAGGAAATGATGATTCAGTCAATCATTGAGAATTTGCAGAGAGAAAATTTAAATCCTGTTGAAGAAGCACG
CGCCTACGAATCTTTAGTAGAAAAAGGATTTACTCACACTGATATAGCGGATAAAATGGGGAAATCTCGTCCTTATATCA
CTAATTTTATTCGTTTGCTTTCCCTACCAGAATATATCTTAGCTGAAGTAGAAAATGGAAAAATTTCTCAAGCGCATGCA
CGTTCACTAGTTGGTTTAGACAAAGAGCAGCAAGACTATTTCTTCCAACTAATCAAAAATGAAGATATTTCTGTGAGAAA
GTTAGAAGCACTTCTTACAGAGAAAAAACACAAGAAGCAGAAAAAAAGTGATTCTTTCATCAAAGATGAAGAAGATAAAT
TAAAAAAAATACTCGGTTTAAGTGTAGAAATTAAACTTTCAAAAAAAGATACTGGAAAGATTATTATCTCCTTTTCAAGT
CAAGAAGAATACGATAGAATTATTAACAGCCTGAAATAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(6-94)

HTH domain found in ParB protein (HTH_ParB)

(145-192)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1X1GXY0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

50.988

100

0.512

Multiple sequence alignment