Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   SOR_RS08290 Genome accession   NC_015291
Coordinates   1669392..1671152 (-) Length   586 a.a.
NCBI ID   WP_000428391.1    Uniprot ID   F2QFC9
Organism   Streptococcus oralis Uo5     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1664392..1676152
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SOR_RS08250 (SOR_1689) - 1664548..1664742 (-) 195 WP_000709162.1 hypothetical protein -
  SOR_RS08255 (SOR_1690) - 1664739..1664945 (-) 207 WP_000390701.1 hypothetical protein -
  SOR_RS08260 (SOR_1691) - 1665071..1666738 (-) 1668 WP_000036689.1 DAK2 domain-containing protein -
  SOR_RS08265 (SOR_1692) - 1666741..1667106 (-) 366 WP_000216438.1 Asp23/Gls24 family envelope stress response protein -
  SOR_RS08270 (SOR_1693) rpmB 1667259..1667447 (-) 189 WP_001140948.1 50S ribosomal protein L28 -
  SOR_RS08275 (SOR_1694) - 1667552..1668226 (-) 675 WP_000725730.1 LiaF transmembrane domain-containing protein -
  SOR_RS08280 (SOR_1695) - 1668232..1668678 (-) 447 WP_000776579.1 LytTR family DNA-binding domain-containing protein -
  SOR_RS08285 (SOR_1696) - 1668792..1669295 (-) 504 WP_000800955.1 phosphatase PAP2 family protein -
  SOR_RS08290 (SOR_1697) rcrQ 1669392..1671152 (-) 1761 WP_000428391.1 ABC transporter ATP-binding protein Regulator
  SOR_RS08295 (SOR_1698) rcrP 1671142..1672911 (-) 1770 WP_000731802.1 ABC transporter ATP-binding protein Regulator
  SOR_RS08300 (SOR_1699) - 1672895..1673356 (-) 462 WP_000360522.1 MarR family winged helix-turn-helix transcriptional regulator -
  SOR_RS08305 (SOR_1700) - 1673549..1674253 (+) 705 WP_041170821.1 CD20-like domain-containing protein -
  SOR_RS08310 (SOR_1701) - 1674303..1675019 (-) 717 WP_000532894.1 YebC/PmpR family DNA-binding transcriptional regulator -

Sequence

Protein


Download         Length: 586 a.a.        Molecular weight: 64554.32 Da        Isoelectric Point: 5.2089

>NTDB_id=40215 SOR_RS08290 WP_000428391.1 1669392..1671152(-) (rcrQ) [Streptococcus oralis Uo5]
MENKKVSVWKQCKPYMAGLQLPLLIAVVAAVISSIITVYGPTKIKEITNLISDGLATEIDLVAVSNIASFLVILYVFGAI
LNYTQAYIFSTSIQHFSKRLRTAIAEKINRLPLGYFDRHSQGDTLSRVTNDVDTAAQSLNQSLGTVLSASFLLIAVLVTM
FGMNWILALVTVVSTLVGFVAVSVIMAKSQGYFKAQQNNLAAVNGYVEEMYSGHNVVTSYNAVDTSKARFAGLNQDLHDS
IWKSQFISGIMMPAMIFVGNFSYVLVIIVGAALALEGHITIGIIVAFMVYVRTFSQPLSQIAQGITSLQQASAAMTRVLE
FLAEAEMQDESHKERQLSNMKGEVVFDHVSFGYTPERTIIHDFSATAHAGQKVAIVGPTGAGKTTIVNLLMKFYEIDKGS
IRIDGVDTKAMKRSEVHDAFSMVLQDTWLFEGTIRENLIYNQTDISDERMMEASKAVGIHHFIMTLPDGYDTVLDDTVTL
SVGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDRLMEGRTSFVIAHRLSTIRNADLILVMKDGNIIEQGN
HEELMAQGGFYADLYNSQFTEDDAEE

Nucleotide


Download         Length: 1761 bp        

>NTDB_id=40215 SOR_RS08290 WP_000428391.1 1669392..1671152(-) (rcrQ) [Streptococcus oralis Uo5]
ATGGAAAATAAAAAAGTGTCGGTCTGGAAACAGTGCAAACCTTATATGGCAGGCCTCCAACTCCCTCTCCTAATAGCAGT
TGTGGCTGCAGTCATTTCAAGTATCATTACCGTTTATGGTCCAACCAAGATTAAGGAAATTACAAACTTGATTTCAGATG
GCTTGGCTACAGAAATCGACTTGGTAGCTGTGTCAAACATTGCTAGCTTTTTAGTGATTCTCTATGTATTTGGAGCTATC
CTTAATTATACACAGGCCTATATCTTTTCAACGAGCATTCAGCATTTTTCAAAACGCTTGCGGACAGCAATCGCTGAAAA
AATCAATCGTTTGCCACTTGGCTATTTTGACCGCCATTCACAAGGAGACACCCTTTCGCGCGTGACCAATGATGTGGATA
CGGCAGCGCAATCTCTCAACCAAAGTTTAGGGACCGTTCTTTCAGCTAGTTTCTTGTTGATTGCTGTCTTGGTGACCATG
TTTGGGATGAACTGGATTTTAGCATTGGTAACAGTTGTATCAACCCTTGTTGGTTTTGTGGCGGTTTCCGTAATCATGGC
CAAGTCACAGGGTTATTTTAAAGCTCAACAAAATAATCTAGCAGCCGTCAATGGTTATGTGGAAGAGATGTACTCTGGCC
ATAATGTAGTGACCAGCTACAACGCAGTAGATACCTCCAAAGCGAGATTTGCTGGTTTAAACCAAGACTTGCATGACAGT
ATCTGGAAATCTCAATTTATCTCTGGTATCATGATGCCAGCCATGATTTTTGTTGGGAACTTTAGTTATGTATTAGTCAT
CATCGTTGGAGCTGCGCTGGCGTTAGAAGGGCATATCACAATAGGGATTATTGTAGCCTTTATGGTTTACGTACGGACCT
TCTCCCAACCTCTGTCACAGATTGCCCAAGGGATTACGAGCTTGCAACAAGCGAGTGCAGCCATGACTCGTGTATTAGAA
TTTTTGGCTGAAGCAGAGATGCAAGATGAATCTCATAAGGAAAGACAATTGAGCAACATGAAAGGGGAAGTAGTCTTTGA
TCATGTGTCCTTTGGCTATACACCAGAGCGCACTATCATCCATGACTTTTCTGCGACTGCTCATGCAGGTCAGAAAGTCG
CTATCGTTGGACCGACTGGGGCTGGTAAGACAACTATTGTCAATCTTTTGATGAAGTTCTATGAGATAGATAAGGGAAGT
ATCCGCATCGATGGTGTGGATACCAAGGCTATGAAGCGTTCAGAAGTGCACGATGCCTTCTCAATGGTCTTGCAGGACAC
TTGGCTTTTTGAAGGAACGATTCGAGAGAACCTGATCTATAATCAGACAGACATCAGTGATGAGCGGATGATGGAAGCCA
GCAAGGCTGTGGGAATCCACCACTTTATCATGACCTTGCCAGATGGTTACGACACTGTTTTGGATGACACCGTGACCTTG
TCTGTTGGACAGAAACAGCTCTTGACCATTGCTCGTGCCCTTCTAAAAGATGCACCGCTCTTGATTTTGGATGAAGCGAC
ATCCTCAGTCGACACACGTACAGAGGAGTTGATTCAAAAAGCCATGGACCGTTTGATGGAGGGTAGAACTTCCTTTGTCA
TCGCTCACCGCTTGTCAACGATTCGTAATGCCGACTTGATCTTGGTCATGAAAGATGGAAATATCATCGAACAAGGCAAT
CATGAAGAACTAATGGCTCAAGGTGGTTTCTATGCGGATCTCTATAATAGTCAATTTACAGAAGATGATGCAGAAGAATA
A

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(361-508)

ABC transporter transmembrane region (ABC_membrane)

(23-298)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB F2QFC9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

66.952

99.659

0.667

Multiple sequence alignment