Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   SOR_RS08295 Genome accession   NC_015291
Coordinates   1671142..1672911 (-) Length   589 a.a.
NCBI ID   WP_000731802.1    Uniprot ID   F2QFD0
Organism   Streptococcus oralis Uo5     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1666142..1677911
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SOR_RS08265 (SOR_1692) - 1666741..1667106 (-) 366 WP_000216438.1 Asp23/Gls24 family envelope stress response protein -
  SOR_RS08270 (SOR_1693) rpmB 1667259..1667447 (-) 189 WP_001140948.1 50S ribosomal protein L28 -
  SOR_RS08275 (SOR_1694) - 1667552..1668226 (-) 675 WP_000725730.1 LiaF transmembrane domain-containing protein -
  SOR_RS08280 (SOR_1695) - 1668232..1668678 (-) 447 WP_000776579.1 LytTR family DNA-binding domain-containing protein -
  SOR_RS08285 (SOR_1696) - 1668792..1669295 (-) 504 WP_000800955.1 phosphatase PAP2 family protein -
  SOR_RS08290 (SOR_1697) rcrQ 1669392..1671152 (-) 1761 WP_000428391.1 ABC transporter ATP-binding protein Regulator
  SOR_RS08295 (SOR_1698) rcrP 1671142..1672911 (-) 1770 WP_000731802.1 ABC transporter ATP-binding protein Regulator
  SOR_RS08300 (SOR_1699) - 1672895..1673356 (-) 462 WP_000360522.1 MarR family winged helix-turn-helix transcriptional regulator -
  SOR_RS08305 (SOR_1700) - 1673549..1674253 (+) 705 WP_041170821.1 CD20-like domain-containing protein -
  SOR_RS08310 (SOR_1701) - 1674303..1675019 (-) 717 WP_000532894.1 YebC/PmpR family DNA-binding transcriptional regulator -
  SOR_RS08315 (SOR_1702) - 1675223..1676593 (-) 1371 WP_013670281.1 MATE family efflux transporter -
  SOR_RS08320 (SOR_1703) - 1676703..1677257 (+) 555 WP_000060284.1 GNAT family N-acetyltransferase -
  SOR_RS08325 (SOR_1704) - 1677389..1677583 (-) 195 WP_000415531.1 PspC domain-containing protein -

Sequence

Protein


Download         Length: 589 a.a.        Molecular weight: 65498.87 Da        Isoelectric Point: 5.8075

>NTDB_id=40216 SOR_RS08295 WP_000731802.1 1671142..1672911(-) (rcrP) [Streptococcus oralis Uo5]
MKKLAKRITGKEWGMIVLTILFTCFSVYLELEVPTYISQITELLGTSGTQLGELWSPAAKMIGLSLLAFFSSVMVGFFAA
RVAASYTTHLRRDVFHQVLDFSQTEIKRFSIPSLLTRTTNDITQVQMLFTMGLQVVTRGPIMAIWAIGKILGKSEYWLWA
VVVAVIVNVLMTTVLMTLAFPKQSVIQKLTDKLNSITRESLTGIRVVRAYNAEDYQDEKFEAANDEVTRLNLFVNRLMAI
MNPIMMAISSGLTLAIYWIGAYIINDASLAERLPLFSDMVVFMSYAMQVVMGFLLMGALFIVLPRTLVSAGRINQVLDLH
SSIENPSHAQTANPSVQGQVEFRDVTFRYSKNSEAVVEQVTFKAEAGQTVAFIGSTGSGKSTLVNLLPRFYDVSDGEILV
DEVNVQDYDLQDLRNKVGYIPQKAVLFSGDVKGNLDFGKSKETPLSEAAMWQALELAQSKSFIEEKEAGLESEVAQGGTN
FSGGQRQRLAIARALARKPEILIFDDSFSALDYKTDRVLRQELAEKTKSMTKLIVAQRISTIMDADLILVLDQGKVVGQG
THKELLATNEVYQEIAYSQLSKEELEHGK

Nucleotide


Download         Length: 1770 bp        

>NTDB_id=40216 SOR_RS08295 WP_000731802.1 1671142..1672911(-) (rcrP) [Streptococcus oralis Uo5]
ATGAAGAAACTCGCTAAACGTATTACAGGAAAAGAGTGGGGAATGATTGTCCTTACGATTCTGTTCACTTGTTTCTCGGT
CTATCTCGAGTTAGAGGTGCCGACTTATATTTCGCAAATTACAGAATTACTGGGAACGTCTGGAACGCAGTTGGGTGAAC
TCTGGTCACCAGCTGCGAAGATGATTGGATTGTCTTTATTGGCTTTCTTTTCATCTGTTATGGTTGGTTTCTTTGCTGCT
CGCGTTGCAGCCTCCTATACAACCCATCTACGTAGAGATGTATTTCATCAGGTTTTAGATTTTTCACAGACAGAAATCAA
ACGCTTTTCAATCCCAAGTCTTTTGACTCGGACGACCAATGATATCACACAGGTACAGATGCTCTTTACCATGGGCTTGC
AAGTGGTTACTCGTGGGCCAATCATGGCAATCTGGGCTATTGGAAAAATCCTTGGTAAGTCCGAATACTGGCTCTGGGCA
GTCGTTGTGGCTGTTATTGTGAATGTCTTGATGACCACCGTTCTCATGACTCTGGCCTTTCCAAAACAATCTGTCATCCA
AAAATTGACAGATAAACTCAATAGCATCACTCGTGAAAGCTTGACAGGGATTCGGGTTGTTCGTGCTTATAATGCTGAGG
ATTACCAAGATGAGAAATTTGAAGCAGCCAATGATGAAGTGACGCGTCTCAATCTCTTTGTCAATCGATTGATGGCGATT
ATGAACCCGATTATGATGGCAATTTCCAGTGGTTTGACCTTAGCTATTTACTGGATTGGTGCCTATATCATCAACGACGC
AAGTTTGGCAGAACGTTTGCCACTCTTTAGTGATATGGTGGTCTTCATGTCCTATGCTATGCAGGTCGTGATGGGCTTCC
TGCTCATGGGAGCACTCTTTATCGTTCTTCCCCGTACCTTGGTTTCGGCAGGACGTATCAATCAAGTATTGGATCTGCAT
TCTTCTATTGAGAATCCTAGTCATGCACAGACAGCGAATCCTTCAGTTCAAGGACAAGTGGAATTCCGTGATGTGACTTT
CCGCTACTCTAAAAATTCAGAAGCAGTCGTGGAACAGGTCACTTTCAAAGCAGAAGCGGGTCAAACCGTAGCCTTCATTG
GATCGACTGGATCAGGTAAGTCCACGCTTGTCAACCTCTTGCCTCGTTTTTACGACGTTTCAGATGGAGAAATCCTAGTG
GACGAAGTTAATGTGCAAGATTATGACTTGCAAGATTTGCGCAATAAGGTCGGCTATATTCCACAAAAAGCTGTACTCTT
TTCTGGAGATGTCAAGGGGAACTTGGACTTTGGTAAGAGCAAAGAAACTCCTCTAAGCGAAGCTGCTATGTGGCAAGCCT
TGGAATTGGCCCAGTCTAAAAGCTTTATCGAGGAAAAGGAAGCAGGACTTGAATCAGAAGTGGCCCAAGGTGGAACCAAC
TTCTCAGGAGGTCAAAGACAGCGTTTGGCCATTGCGCGTGCCTTGGCTCGTAAACCAGAGATTCTCATCTTTGATGATTC
CTTCTCAGCCTTGGACTACAAGACAGATCGTGTCCTACGCCAAGAACTAGCTGAGAAAACAAAATCCATGACCAAGCTCA
TCGTAGCGCAACGGATTTCTACCATTATGGACGCCGACCTGATCTTAGTTTTGGATCAAGGTAAAGTCGTGGGACAAGGC
ACCCACAAGGAACTTCTAGCTACCAACGAAGTCTACCAAGAAATTGCCTACTCACAACTATCGAAGGAGGAATTGGAACA
TGGAAAATAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(358-507)

ABC transporter transmembrane region (ABC_membrane)

(17-292)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB F2QFD0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

65.058

100

0.664

Multiple sequence alignment