Detailed information NTG0401509

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: GKC13_RS02860
• Genome accession: NZ_CP046134
• Coordinates: 539086..540171 (+)
• Length: 361 a.a.
• NCBI ID: WP_011226304.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain MAG_rmk202_sterm
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 534086..545171

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GKC13_RS02845 (GKC13_02855)	amiA3	534623..536596 (+)	1974	WP_101415657.1	peptide ABC transporter substrate-binding protein	Regulator
GKC13_RS02850 (GKC13_02860)	amiC	536657..538150 (+)	1494	WP_064355564.1	ABC transporter permease	Regulator
GKC13_RS02855 (GKC13_02865)	amiD	538150..539076 (+)	927	WP_064355560.1	oligopeptide ABC transporter permease OppC	Regulator
GKC13_RS02860 (GKC13_02870)	amiE	539086..540171 (+)	1086	WP_011226304.1	ABC transporter ATP-binding protein	Regulator
GKC13_RS02865 (GKC13_02875)	amiF	540164..541093 (+)	930	WP_011681415.1	ATP-binding cassette domain-containing protein	Regulator
GKC13_RS02870 (GKC13_02880)	-	541143..541928 (-)	786	WP_207559818.1	ABC transporter permease	-
GKC13_RS02875 (GKC13_02885)	-	541940..542638 (-)	699	WP_011226301.1	ABC transporter ATP-binding protein	-
GKC13_RS02880 (GKC13_02890)	-	542643..543020 (-)	378	WP_011226300.1	GntR family transcriptional regulator	-
GKC13_RS02885 (GKC13_02895)	-	543204..543998 (+)	795	WP_084829753.1	HAD family hydrolase	-
GKC13_RS02890 (GKC13_02900)	-	543991..544809 (+)	819	WP_011681411.1	Cof-type HAD-IIB family hydrolase	-

Sequence

Protein

• Length: 361 a.a.
• Molecular weight: 39864.62 Da
• Isoelectric Point: 4.7435

>NTDB_id=401509 GKC13_RS02860 WP_011226304.1 539086..540171(+) (amiE) [Streptococcus thermophilus strain MAG_rmk202_sterm]
MTENKNVILSARDIVVEFDVRDRVLTAIRGVSLDLVEGEVLALVGESGSGKSVLTKTFTGMLEENGRVASGSIDYRGKDL
TKFKSHQDWAAIRGAKIATIFQDPMTSLNPIKTIGSQIIEVIVKHQGKTAKEAKKMAIDYMDKVGIPDAEKRFNEYPFQY
SGGMRQRIVIAIALACRPDVLICDEPTTALDVTIQAQIIDLLKSLKEEYGFSVIFITHDLGVVASIADKVAVMYAGEIIE
YATVEEIFYEPCHPYTWSLLSSLPQLADDNGKLFSIPGTPPSLYTPVVGDAFALRSDYALQIDFEEKAPQFQVSDTHWAK
TWLLHEDAPKVDKPAVIQNLHEKILANMGFAHLGDEEEGNA

Nucleotide

• Length: 1086 bp

>NTDB_id=401509 GKC13_RS02860 WP_011226304.1 539086..540171(+) (amiE) [Streptococcus thermophilus strain MAG_rmk202_sterm]
ATGACAGAAAATAAAAATGTAATATTATCGGCTCGCGATATCGTCGTGGAATTTGACGTTCGTGACCGTGTTTTGACAGC
TATTCGAGGGGTTTCTCTTGATTTAGTTGAAGGTGAAGTTTTAGCCTTGGTTGGTGAGTCTGGTTCAGGAAAATCAGTCT
TGACTAAAACTTTTACAGGGATGCTGGAAGAAAATGGTCGTGTAGCTAGCGGATCTATCGACTACCGTGGCAAAGACTTG
ACTAAATTTAAGAGTCACCAAGATTGGGCAGCTATCCGTGGAGCTAAGATTGCAACTATTTTCCAAGATCCAATGACCAG
TCTTAACCCAATTAAGACTATCGGAAGTCAAATTATTGAAGTTATTGTTAAGCACCAAGGGAAAACAGCCAAGGAAGCTA
AAAAAATGGCAATTGATTACATGGACAAGGTTGGTATTCCAGATGCTGAAAAACGTTTCAATGAATATCCTTTCCAATAC
TCTGGTGGGATGCGTCAACGTATCGTTATTGCCATTGCCTTGGCTTGTCGTCCTGATGTCCTTATCTGTGACGAACCAAC
AACTGCCCTTGATGTGACCATTCAAGCTCAAATCATTGACCTCTTGAAATCACTCAAAGAGGAGTATGGTTTCTCGGTCA
TTTTCATTACCCATGACCTTGGCGTCGTAGCAAGTATCGCGGACAAGGTTGCTGTCATGTATGCTGGCGAAATCATTGAA
TACGCAACTGTTGAGGAAATTTTCTATGAGCCTTGTCATCCATACACGTGGAGCTTGCTTTCAAGTCTGCCACAATTGGC
TGATGATAATGGAAAACTCTTCTCAATTCCAGGGACGCCACCATCACTTTATACACCAGTTGTTGGGGATGCCTTTGCCT
TGCGTTCAGATTATGCTTTGCAGATTGATTTTGAGGAAAAAGCACCACAATTCCAAGTTTCAGATACTCACTGGGCTAAG
ACCTGGCTCTTACATGAGGATGCGCCAAAAGTTGATAAACCTGCGGTTATCCAAAATCTACATGAAAAAATCCTAGCCAA
TATGGGATTTGCACATTTAGGAGATGAGGAGGAAGGCAATGCCTGA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (29-187)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (239-300)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus thermophilus LMG 18311	100	100	1
amiE	Streptococcus thermophilus LMD-9	100	100	1
amiE	Streptococcus salivarius strain HSISS4	96.953	100	0.97
oppD	Streptococcus mutans UA159	54.441	96.676	0.526