Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   GKQ56_RS02940 Genome accession   NZ_CP046111
Coordinates   592432..593730 (-) Length   432 a.a.
NCBI ID   WP_002415025.1    Uniprot ID   -
Organism   Enterococcus faecalis strain 111540047-1     
Function   repress competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 587432..598730
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GKQ56_RS02915 (GKQ56_03015) - 588901..589242 (-) 342 WP_002404031.1 PepSY domain-containing protein -
  GKQ56_RS02920 (GKQ56_03020) pepA 589549..590625 (+) 1077 WP_002355013.1 glutamyl aminopeptidase -
  GKQ56_RS02925 (GKQ56_03025) - 590637..590951 (+) 315 WP_002355015.1 thioredoxin family protein -
  GKQ56_RS02930 (GKQ56_03030) - 591099..591554 (+) 456 WP_002385249.1 universal stress protein -
  GKQ56_RS02935 (GKQ56_03035) ytpR 591765..592385 (+) 621 WP_002355018.1 YtpR family tRNA-binding protein -
  GKQ56_RS02940 (GKQ56_03040) htrA 592432..593730 (-) 1299 WP_002415025.1 S1C family serine protease Regulator
  GKQ56_RS02945 (GKQ56_03045) rlmH 594131..594610 (+) 480 WP_002355021.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -

Sequence


Protein


Download         Length: 432 a.a.        Molecular weight: 44845.98 Da        Isoelectric Point: 4.9968

>NTDB_id=401033 GKQ56_RS02940 WP_002415025.1 592432..593730(-) (htrA) [Enterococcus faecalis strain 111540047-1]
MQRKDVTPNSDKKSLLQKFGIGLAGGLLGGALILGGAYSGIIPTPNGGNNAATTTSTNHGDTKVSNVSYNVSSDVTKAVK
KVQNSVVSIINMQSASNNSSADDPFGGLFGGNEGTQDSSGNNGNDLEAASEGSGVIYKKDGKTAYVVTNNHVVDKAQGLE
VVLSDGTKVKGELVGTDAYTDLAVIKISSDKVDQVAEFGNSSKITVGEPAIAIGSPLGSDYANSVTQGIISSVNRNITNK
NESGETININAIQTDAAINPGNSGGPLINIEGQVIGINSVKIVQSTSQVSVEGMGFAIPSNDVVNIINQLEKDGKVTRPA
LGITMSDLTGISSQQQEQILKIPASVKTGVVVRGVEAATPAEKAGLEKYDVITKVDGQDVSSTTDLQSALYKKKVGDKME
VTYYRGSKEMKATIDLTIDKSALTQQNNRSNQ

Nucleotide


Download         Length: 1299 bp        

>NTDB_id=401033 GKQ56_RS02940 WP_002415025.1 592432..593730(-) (htrA) [Enterococcus faecalis strain 111540047-1]
ATGCAACGAAAAGATGTTACACCTAATTCAGATAAAAAAAGTTTATTGCAAAAATTTGGGATTGGTTTAGCTGGCGGCTT
ACTTGGTGGCGCTCTTATTCTAGGAGGCGCTTATTCTGGGATTATTCCCACACCCAACGGCGGAAATAATGCGGCGACGA
CGACGTCCACTAATCACGGCGACACAAAAGTCAGCAATGTGAGTTACAATGTTTCTAGCGATGTCACAAAAGCCGTGAAA
AAAGTTCAAAATTCTGTGGTTTCTATCATTAATATGCAAAGTGCTAGCAACAATTCTTCGGCAGATGATCCTTTTGGGGG
ATTGTTCGGTGGGAATGAAGGTACTCAAGACTCTTCCGGCAACAATGGTAACGATTTAGAAGCAGCCAGTGAAGGTAGTG
GGGTTATTTATAAGAAAGATGGTAAAACGGCTTATGTCGTGACAAATAACCACGTCGTAGATAAAGCGCAAGGATTGGAA
GTTGTTTTATCTGATGGTACCAAAGTGAAAGGCGAATTAGTCGGAACCGATGCTTACACGGATTTAGCCGTGATTAAAAT
TTCTTCCGACAAAGTTGATCAAGTCGCTGAGTTTGGGAATTCTAGTAAAATCACAGTCGGTGAGCCTGCTATTGCGATTG
GTTCCCCTCTAGGTTCTGATTATGCTAACTCTGTCACACAAGGAATCATCTCTTCTGTGAATAGAAATATTACCAATAAA
AACGAGTCTGGTGAAACCATCAATATTAATGCCATTCAAACCGATGCTGCCATCAATCCAGGAAACTCCGGTGGTCCACT
AATCAATATTGAAGGACAAGTCATTGGAATTAACTCAGTAAAAATTGTGCAATCAACTAGTCAAGTGAGCGTTGAAGGGA
TGGGCTTTGCCATTCCAAGTAATGACGTAGTCAACATTATCAACCAATTAGAAAAAGATGGTAAAGTGACGCGGCCAGCT
CTCGGGATTACGATGTCTGATTTAACAGGTATCTCTTCACAACAACAAGAACAAATTTTAAAAATTCCAGCTTCTGTAAA
AACTGGCGTAGTGGTTCGTGGCGTTGAAGCAGCGACCCCTGCTGAAAAGGCTGGATTGGAAAAATACGATGTTATCACGA
AAGTTGACGGCCAAGACGTAAGCTCTACTACAGATTTACAAAGCGCGCTTTACAAGAAAAAAGTTGGCGACAAAATGGAA
GTGACTTATTATCGTGGTTCTAAAGAAATGAAAGCAACCATCGATTTAACCATTGATAAATCAGCTTTAACACAACAAAA
TAATCGCAGCAATCAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus gordonii str. Challis substr. CH1

52.927

94.907

0.502

  htrA Streptococcus mutans UA159

58.356

84.491

0.493

  htrA Streptococcus mitis NCTC 12261

54.865

85.648

0.47

  htrA Streptococcus pneumoniae TIGR4

55.524

81.713

0.454

  htrA Streptococcus pneumoniae Rx1

55.524

81.713

0.454

  htrA Streptococcus pneumoniae D39

55.524

81.713

0.454

  htrA Streptococcus pneumoniae R6

55.524

81.713

0.454


Multiple sequence alignment