Detailed information NTG0400588

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: GJS34_RS05205
• Genome accession: NZ_CP046042
• Coordinates: 1085833..1086678 (+)
• Length: 281 a.a.
• NCBI ID: WP_012515603.1
• Uniprot ID: -
• Organism: Streptococcus equi subsp. zooepidemicus strain TN-714097
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1080833..1091678

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GJS34_RS05190 (GJS34_05200)	-	1082735..1083367 (+)	633	Protein_1004	putative bacteriocin export ABC transporter	-
GJS34_RS05195 (GJS34_05205)	ylqF	1083960..1084814 (+)	855	WP_014622846.1	ribosome biogenesis GTPase YlqF	-
GJS34_RS05200 (GJS34_05210)	-	1084804..1085577 (+)	774	WP_038674821.1	ribonuclease HII	-
GJS34_RS05205 (GJS34_05215)	dprA	1085833..1086678 (+)	846	WP_012515603.1	DNA-processing protein DprA	Machinery gene
GJS34_RS05210 (GJS34_05220)	topA	1086779..1088911 (+)	2133	WP_154293440.1	type I DNA topoisomerase	-
GJS34_RS05215 (GJS34_05225)	-	1089026..1089673 (+)	648	WP_038674303.1	SatD family protein	-
GJS34_RS05220 (GJS34_05230)	-	1089694..1090407 (+)	714	WP_012677971.1	DUF3307 domain-containing protein	-

Sequence

Protein

• Length: 281 a.a.
• Molecular weight: 31374.30 Da
• Isoelectric Point: 8.8428

>NTDB_id=400588 GJS34_RS05205 WP_012515603.1 1085833..1086678(+) (dprA) [Streptococcus equi subsp. zooepidemicus strain TN-714097]
MNNFELYKLKKAGLTNLNILNLIDYQQRNNKSLSLRDMAVVSCCKNPVLFIETYKQLNVALLKKEFNQFPSLSILDKQYP
LALREIYNPPVLLFYQGDLSLLEKPKLAVVGSRESSEIGTRSVYKIIKELKNHFVIVSGLARGIDTSAHLACLKAGGQTI
AVIGTGLDRYYPKENHQLQEFLSQRHLVLSEYGAGEAALSYHFPERNRIIAGLSRGVLVVEAKQRSGSLITCQLAMEEGR
DIFVVPDNILNGTSAGCLKLIKDGASCVTHGRDILSEYYYS

Nucleotide

• Length: 846 bp

>NTDB_id=400588 GJS34_RS05205 WP_012515603.1 1085833..1086678(+) (dprA) [Streptococcus equi subsp. zooepidemicus strain TN-714097]
ATGAACAATTTTGAACTTTATAAATTAAAAAAGGCTGGGCTGACTAATTTAAATATTCTTAACCTTATTGACTACCAGCA
GCGTAATAATAAGTCTCTATCCCTTAGAGATATGGCAGTGGTTTCTTGCTGCAAAAATCCAGTTTTATTTATTGAAACCT
ACAAGCAATTAAATGTCGCCTTGTTAAAAAAGGAATTCAATCAGTTTCCGAGCTTATCTATCCTAGATAAGCAATACCCA
TTGGCTCTGAGGGAAATCTACAATCCTCCTGTTTTACTCTTTTATCAAGGTGATTTAAGCCTGTTAGAAAAACCTAAGCT
GGCAGTCGTTGGATCTAGAGAATCCAGTGAAATTGGGACGCGGTCTGTTTATAAAATCATTAAAGAGCTTAAGAATCACT
TTGTCATTGTCAGCGGGCTTGCTAGAGGTATTGATACCAGTGCTCATCTCGCTTGCTTGAAAGCAGGTGGGCAAACCATA
GCTGTTATCGGGACTGGCCTAGATCGCTACTATCCAAAGGAAAATCACCAGCTACAGGAGTTTTTATCTCAGCGTCATCT
TGTGCTCAGTGAGTATGGAGCTGGAGAGGCCGCCTTGTCTTATCATTTCCCTGAAAGAAACCGTATTATCGCAGGTCTTA
GTCGAGGTGTCCTTGTTGTTGAGGCTAAGCAGCGCTCTGGCTCTTTGATTACCTGTCAGCTAGCTATGGAAGAGGGACGT
GATATTTTTGTCGTACCTGACAATATTCTTAATGGTACATCAGCGGGCTGTTTGAAGCTGATCAAAGATGGTGCCAGCTG
TGTCACTCATGGCAGAGACATTCTTTCAGAATACTACTATTCTTAA

Domains

Predicted by InterproScan.

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (1-61)

• DNA recombination-mediator protein A (DNA_processg_A) (71-269)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Streptococcus mutans UA159	68.929	99.644	0.687
dprA/cilB/dalA	Streptococcus mitis SK321	59.286	99.644	0.591
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	58.929	99.644	0.587
dprA/cilB/dalA	Streptococcus pneumoniae D39	58.929	99.644	0.587
dprA/cilB/dalA	Streptococcus pneumoniae R6	58.929	99.644	0.587
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	58.929	99.644	0.587
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	58.571	99.644	0.584
dprA	Lactococcus lactis subsp. cremoris KW2	56.94	100	0.569
dprA	Bacillus subtilis subsp. subtilis str. 168	42.4	88.968	0.377