Detailed information NTG0400585

Bioinformatically predicted

Overview

• Name: ciaR
• Type: Regulator
• Locus tag: GJS34_RS04935
• Genome accession: NZ_CP046042
• Coordinates: 1034713..1035387 (+)
• Length: 224 a.a.
• NCBI ID: WP_012515548.1
• Uniprot ID: B4U2R0
• Organism: Streptococcus equi subsp. zooepidemicus strain TN-714097
• Function: repress competence development (predicted from homology) Competence regulation

Genomic Context

Location: 1029713..1040387

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GJS34_RS04920 (GJS34_04930)	pstB	1030042..1030800 (+)	759	WP_038674325.1	phosphate ABC transporter ATP-binding protein PstB	-
GJS34_RS04925 (GJS34_04935)	phoU	1030871..1031524 (+)	654	WP_012678018.1	phosphate signaling complex protein PhoU	-
GJS34_RS04930 (GJS34_04940)	-	1031758..1034295 (+)	2538	WP_014622811.1	M1 family metallopeptidase	-
GJS34_RS04935 (GJS34_04945)	ciaR	1034713..1035387 (+)	675	WP_012515548.1	response regulator transcription factor	Regulator
GJS34_RS04940 (GJS34_04950)	ciaH	1035380..1036690 (+)	1311	WP_014622812.1	sensor histidine kinase	Regulator
GJS34_RS04945 (GJS34_04955)	-	1037074..1037508 (+)	435	WP_012678015.1	hypothetical protein	-
GJS34_RS10430	-	1037590..1037766 (+)	177	WP_014622814.1	hypothetical protein	-
GJS34_RS04950 (GJS34_04960)	-	1037782..1038189 (+)	408	WP_014622815.1	hypothetical protein	-
GJS34_RS04955 (GJS34_04965)	-	1038199..1038489 (+)	291	WP_014622816.1	hypothetical protein	-
GJS34_RS04960 (GJS34_04970)	-	1038413..1038796 (+)	384	WP_038674323.1	hypothetical protein	-
GJS34_RS04965 (GJS34_04975)	-	1038798..1039049 (+)	252	WP_014622818.1	hypothetical protein	-
GJS34_RS04970 (GJS34_04980)	-	1039065..1039484 (+)	420	WP_014622819.1	hypothetical protein	-
GJS34_RS04975 (GJS34_04985)	-	1039654..1039980 (+)	327	WP_014622820.1	hypothetical protein	-

Sequence

Protein

• Length: 224 a.a.
• Molecular weight: 25541.52 Da
• Isoelectric Point: 4.5644

>NTDB_id=400585 GJS34_RS04935 WP_012515548.1 1034713..1035387(+) (ciaR) [Streptococcus equi subsp. zooepidemicus strain TN-714097]
MIKLLLVEDDLSLSNSIFDFLDDFADVTQVFDGDEGLYEAESGIYDLILLDLMLPEKDGFQVLKALREKDIKIPVLIMTA
KESIDDKGHGFELGADDYLTKPFYLEELKMRIQALLKRVGKFNDKSLKFGNLTVDTTRKEVQVNGQAIELLGKELDLLIY
ILQNQNVILPKSQIFDRIWGFDSDTTISVVEVYVSKIRKKLKGTDFVNHLQTLRSVGYILKANE

Nucleotide

• Length: 675 bp

>NTDB_id=400585 GJS34_RS04935 WP_012515548.1 1034713..1035387(+) (ciaR) [Streptococcus equi subsp. zooepidemicus strain TN-714097]
ATGATAAAACTATTATTAGTAGAAGACGATTTAAGCTTATCAAATTCTATCTTTGATTTTTTAGATGACTTTGCTGATGT
GACGCAGGTTTTTGATGGTGACGAAGGACTCTATGAGGCAGAAAGCGGTATTTATGATTTGATTCTGTTAGATTTGATGC
TGCCTGAAAAGGATGGCTTTCAAGTGTTAAAAGCCTTACGTGAAAAAGACATCAAAATTCCCGTCTTGATCATGACTGCC
AAAGAAAGCATCGATGACAAGGGGCATGGCTTTGAGCTTGGTGCTGATGACTATTTAACTAAGCCCTTTTACCTAGAAGA
ATTAAAAATGCGGATTCAGGCCTTGCTTAAGCGTGTAGGAAAGTTTAATGACAAGAGCCTTAAATTTGGCAACTTGACTG
TAGATACTACCCGTAAAGAGGTACAGGTCAATGGGCAGGCCATAGAGCTATTAGGCAAGGAGCTTGATTTACTAATCTAT
ATCCTTCAAAATCAAAATGTTATTTTGCCAAAATCACAAATTTTTGATCGTATCTGGGGCTTTGATAGTGATACCACTAT
CTCTGTTGTAGAGGTCTATGTCTCTAAAATTCGTAAGAAGCTTAAGGGGACAGACTTTGTTAATCATCTTCAAACCTTGA
GAAGTGTAGGATATATCTTAAAAGCTAATGAATAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (5-112)

• Transcriptional regulatory protein, C terminal (Trans_reg_C) (145-220)

3D structure

• AlphaFold DB: B4U2R0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ciaR	Streptococcus mutans UA159	84.615	98.661	0.835
ciaR	Streptococcus pneumoniae Rx1	80.543	98.661	0.795
ciaR	Streptococcus pneumoniae D39	80.543	98.661	0.795
ciaR	Streptococcus pneumoniae R6	80.543	98.661	0.795
ciaR	Streptococcus pneumoniae TIGR4	80.543	98.661	0.795
covR	Lactococcus lactis subsp. lactis strain DGCC12653	38.428	100	0.393
covR	Streptococcus salivarius strain HSISS4	35.841	100	0.362