Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | HR073_RS03185 | Genome accession | NZ_CP054227 |
| Coordinates | 691790..692230 (-) | Length | 146 a.a. |
| NCBI ID | WP_000360904.1 | Uniprot ID | P36647 |
| Organism | Escherichia coli strain EcPF15 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 686790..697230
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HR073_RS03160 (HR073_03160) | coaE | 687280..687900 (-) | 621 | WP_001269513.1 | dephospho-CoA kinase | - |
| HR073_RS03165 | - | 687925..687969 (+) | 45 | WP_120795372.1 | protein YacM | - |
| HR073_RS03170 (HR073_03165) | guaC | 688125..689168 (+) | 1044 | WP_001217337.1 | GMP reductase | - |
| HR073_RS03175 (HR073_03170) | hofC | 689203..690405 (-) | 1203 | WP_000157287.1 | protein transport protein HofC | - |
| HR073_RS03180 (HR073_03175) | pilB | 690395..691780 (-) | 1386 | WP_001025168.1 | type II secretion system protein GspE | Machinery gene |
| HR073_RS03185 (HR073_03180) | pilA | 691790..692230 (-) | 441 | WP_000360904.1 | prepilin peptidase-dependent pilin | Machinery gene |
| HR073_RS03190 (HR073_03185) | nadC | 692433..693326 (-) | 894 | WP_001135167.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
| HR073_RS03195 (HR073_03190) | ampD | 693414..693965 (+) | 552 | WP_000923726.1 | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | - |
| HR073_RS03200 (HR073_03195) | ampE | 693962..694816 (+) | 855 | WP_000172005.1 | beta-lactamase regulator AmpE | - |
| HR073_RS03205 (HR073_03200) | aroP | 694859..696232 (-) | 1374 | WP_000969912.1 | aromatic amino acid transporter AroP | - |
Sequence
Protein
Download Length: 146 a.a. Molecular weight: 15621.75 Da Isoelectric Point: 4.3938
>NTDB_id=398305 HR073_RS03185 WP_000360904.1 691790..692230(-) (pilA) [Escherichia coli strain EcPF15]
MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGLDTCDGGSNGIPSPTTTR
YVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGWTRNCNIQSDSALQQACEDVFRFDDAN
MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGLDTCDGGSNGIPSPTTTR
YVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGWTRNCNIQSDSALQQACEDVFRFDDAN
Nucleotide
Download Length: 441 bp
>NTDB_id=398305 HR073_RS03185 WP_000360904.1 691790..692230(-) (pilA) [Escherichia coli strain EcPF15]
ATGGACAAGCAACGCGGTTTTACACTTATCGAACTGATGGTGGTTATTGGCATCATTGCCATTTTAAGCGCCATTGGTAT
TCCCGCTTATCAAAACTACCTGCGCAAAGCCGCACTCACCGACATGCTACAAACCTTTGTGCCTTACCGTACCGCCGTAG
AGTTGTGCGCGCTGGAACATGGTGGATTAGATACCTGCGACGGTGGCAGTAATGGCATCCCCTCGCCTACCACCACCCGC
TATGTTTCAGCCATGAGTGTGGCAAAGGGCGTGGTGTCGCTGACCGGGCAAGAAAGTCTCAATGGGCTAAGCGTCGTCAT
GACGCCGGGTTGGGATAACGCAAACGGCGTCACCGGTTGGACGCGCAACTGCAATATTCAAAGTGACAGCGCATTGCAGC
AAGCCTGCGAAGATGTCTTCCGCTTTGATGACGCCAACTAA
ATGGACAAGCAACGCGGTTTTACACTTATCGAACTGATGGTGGTTATTGGCATCATTGCCATTTTAAGCGCCATTGGTAT
TCCCGCTTATCAAAACTACCTGCGCAAAGCCGCACTCACCGACATGCTACAAACCTTTGTGCCTTACCGTACCGCCGTAG
AGTTGTGCGCGCTGGAACATGGTGGATTAGATACCTGCGACGGTGGCAGTAATGGCATCCCCTCGCCTACCACCACCCGC
TATGTTTCAGCCATGAGTGTGGCAAAGGGCGTGGTGTCGCTGACCGGGCAAGAAAGTCTCAATGGGCTAAGCGTCGTCAT
GACGCCGGGTTGGGATAACGCAAACGGCGTCACCGGTTGGACGCGCAACTGCAATATTCAAAGTGACAGCGCATTGCAGC
AAGCCTGCGAAGATGTCTTCCGCTTTGATGACGCCAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Haemophilus influenzae 86-028NP |
43.089 |
84.247 |
0.363 |