Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | GII77_RS12985 | Genome accession | NZ_CP045825 |
| Coordinates | 2512596..2513633 (-) | Length | 345 a.a. |
| NCBI ID | WP_044052501.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain 75 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2507596..2518633
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GII77_RS12935 (GII77_12935) | tasA | 2507694..2508479 (-) | 786 | WP_015251717.1 | biofilm matrix protein TasA | - |
| GII77_RS12940 (GII77_12940) | sipW | 2508543..2509115 (-) | 573 | WP_003246088.1 | signal peptidase I SipW | - |
| GII77_RS12945 (GII77_12945) | tapA | 2509099..2509860 (-) | 762 | WP_015251716.1 | amyloid fiber anchoring/assembly protein TapA | - |
| GII77_RS12950 (GII77_12950) | yqzG | 2510132..2510458 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| GII77_RS12955 (GII77_12955) | spoIITA | 2510500..2510679 (-) | 180 | WP_029726723.1 | YqzE family protein | - |
| GII77_RS12960 (GII77_12960) | comGG | 2510750..2511124 (-) | 375 | WP_015251714.1 | ComG operon protein ComGG | Machinery gene |
| GII77_RS12965 (GII77_12965) | comGF | 2511125..2511508 (-) | 384 | WP_015251713.1 | ComG operon protein ComGF | Machinery gene |
| GII77_RS12970 (GII77_12970) | comGE | 2511534..2511881 (-) | 348 | WP_003230165.1 | ComG operon protein 5 | Machinery gene |
| GII77_RS12975 (GII77_12975) | comGD | 2511865..2512296 (-) | 432 | WP_004398628.1 | comG operon protein ComGD | Machinery gene |
| GII77_RS12980 (GII77_12980) | comGC | 2512286..2512582 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| GII77_RS12985 (GII77_12985) | comGB | 2512596..2513633 (-) | 1038 | WP_044052501.1 | comG operon protein ComGB | Machinery gene |
| GII77_RS12990 (GII77_12990) | comGA | 2513620..2514690 (-) | 1071 | WP_004399124.1 | competence protein ComGA | Machinery gene |
| GII77_RS12995 (GII77_12995) | - | 2514903..2515100 (-) | 198 | WP_014480259.1 | CBS domain-containing protein | - |
| GII77_RS13000 (GII77_13000) | corA | 2515102..2516055 (-) | 954 | WP_004399136.1 | magnesium transporter CorA | - |
| GII77_RS13005 (GII77_13005) | yqhB | 2516198..2517526 (+) | 1329 | WP_029726716.1 | hemolysin family protein | - |
| GII77_RS13010 (GII77_13010) | rsbRD | 2517579..2518415 (-) | 837 | WP_003230149.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39746.21 Da Isoelectric Point: 9.6257
>NTDB_id=398310 GII77_RS12985 WP_044052501.1 2512596..2513633(-) (comGB) [Bacillus subtilis strain 75]
MKKIRKVWLLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWLLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=398310 GII77_RS12985 WP_044052501.1 2512596..2513633(-) (comGB) [Bacillus subtilis strain 75]
ATGAAAAAGATTAGAAAAGTCTGGTTGTTAAAGGATCAAGCCAGGTTATTAAAGAGGCTTGGTGAAATGACTGCGGGCGG
ATATACACTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCAATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTAAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTTGTTAAAGGATCAAGCCAGGTTATTAAAGAGGCTTGGTGAAATGACTGCGGGCGG
ATATACACTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCAATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTAAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
99.69 |
93.623 |
0.933 |