Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   GII81_RS17325 Genome accession   NZ_CP045820
Coordinates   3299005..3301302 (-) Length   765 a.a.
NCBI ID   WP_153912412.1    Uniprot ID   -
Organism   Bacillus subtilis strain MB9_B1     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3294005..3306302
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GII81_RS17285 (GII81_17285) mrpB 3294470..3294901 (+) 432 WP_038429537.1 Na(+)/H(+) antiporter subunit B -
  GII81_RS17290 (GII81_17290) mrpC 3294901..3295242 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  GII81_RS17295 (GII81_17295) mrpD 3295235..3296716 (+) 1482 WP_038429539.1 Na+/H+ antiporter subunit D -
  GII81_RS17300 (GII81_17300) mrpE 3296722..3297198 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  GII81_RS17305 (GII81_17305) mrpF 3297198..3297482 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  GII81_RS17310 (GII81_17310) mnhG 3297466..3297840 (+) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  GII81_RS17315 (GII81_17315) yuxO 3297881..3298261 (-) 381 WP_017695528.1 hotdog fold thioesterase -
  GII81_RS17320 (GII81_17320) comA 3298280..3298924 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  GII81_RS17325 (GII81_17325) comP 3299005..3301302 (-) 2298 WP_153912412.1 histidine kinase Regulator
  GII81_RS17330 (GII81_17330) comX 3301310..3301471 (-) 162 WP_049140565.1 competence pheromone ComX -
  GII81_RS17335 (GII81_17335) - 3301486..3302346 (-) 861 WP_040081966.1 polyprenyl synthetase family protein -
  GII81_RS17340 (GII81_17340) degQ 3302531..3302671 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  GII81_RS17345 (GII81_17345) - 3302893..3303018 (+) 126 WP_003228793.1 hypothetical protein -
  GII81_RS17350 (GII81_17350) - 3303134..3303502 (+) 369 WP_119899729.1 hypothetical protein -
  GII81_RS17355 (GII81_17355) pdeH 3303478..3304707 (-) 1230 WP_046381301.1 cyclic di-GMP phosphodiesterase -

Sequence


Protein


Download         Length: 765 a.a.        Molecular weight: 88336.63 Da        Isoelectric Point: 8.3224

>NTDB_id=398003 GII81_RS17325 WP_153912412.1 3299005..3301302(-) (comP) [Bacillus subtilis strain MB9_B1]
MKSRNNKISVVLVVLSLIYVIYLTYISNNNLLVGATVSKGKNGDIVITNVDEFSMASYSGIEKGDIVKSINNKKINTNEI
KMNKLKNVSSMIVERNGHNLELKMTLFNDKNFTTYLIPLIFYIVCLFCCFFILKINESKNLLSAVVLIIFLLSASIAFIS
AGGSAKGDMLSRLIMVVTLISVPLNYLLFLYQYFKELGTKLFNKKVFILYLIPVINVVCEIFRSHLFFRDYVPKLNLLAF
FFLFIIVGVYFSIILIKNKDTEQAHIIKVLTIINIFSFSPFLCLYLIPYVFLNAHYVSSFLAASFMLLIPFSLVFQFMTN
KIYNVDFILSRLRYYGFLALTPTIILISTIELISSPDSDFYSVKLTFLIYIIMLAVFYYKEVLDFRFRLKRVSEKFNYQD
SIYKFTQMIRDSTSLSQVFEELKNTILEVSLVSRAHVYEVSADGNIKLYDDENVNSFEKVYQKEFRKVTSEIGKIVEFNK
GFVMKIGERGGKSFVILCLSKMNTPRLTLEELSWLKTLAFYTNVSIENVMKIEELMSHLEEIKQQESNPVWLKKLMYTIE
EKQRSDLARDLHDSVLQDLISLKRQCELFLGDFKKDDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLYDLGLV
KALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDDGVGFD
QEKNTEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2298 bp        

>NTDB_id=398003 GII81_RS17325 WP_153912412.1 3299005..3301302(-) (comP) [Bacillus subtilis strain MB9_B1]
ATGAAGTCTAGAAATAACAAAATTTCTGTAGTGTTAGTTGTATTAAGTTTGATTTATGTTATTTATTTGACTTATATTAG
TAATAATAATTTATTAGTAGGGGCAACTGTCTCTAAAGGAAAAAATGGCGATATTGTAATTACCAATGTAGATGAATTTT
CAATGGCTTCATACAGCGGTATAGAAAAAGGAGATATCGTAAAGAGTATTAATAATAAAAAGATAAACACAAACGAAATA
AAAATGAACAAACTAAAAAATGTAAGTTCGATGATTGTGGAAAGAAATGGACATAATCTTGAGTTGAAAATGACCTTATT
TAATGATAAAAATTTCACTACTTACTTAATACCGTTAATATTTTATATTGTTTGTTTATTTTGTTGCTTTTTTATATTAA
AAATAAATGAATCAAAGAACCTTCTCTCAGCTGTAGTTTTAATTATCTTTCTGTTGTCTGCCTCTATTGCATTTATAAGT
GCTGGAGGGTCTGCTAAGGGAGATATGCTGAGCAGGCTTATAATGGTGGTAACATTAATATCTGTTCCGCTAAACTATCT
TCTCTTTCTTTATCAATATTTCAAAGAATTAGGAACCAAATTATTTAATAAGAAAGTTTTTATTTTATATTTGATTCCGG
TCATAAATGTAGTTTGTGAAATTTTTCGTTCACATCTTTTCTTTCGAGATTATGTTCCTAAATTAAATTTACTTGCTTTT
TTCTTTTTATTTATTATAGTAGGGGTTTATTTTAGTATCATACTAATTAAAAATAAAGACACTGAACAAGCACATATTAT
TAAGGTTCTCACTATCATTAATATCTTTTCTTTTTCGCCTTTTCTGTGTTTATATTTGATACCTTACGTGTTTTTAAATG
CACATTATGTTTCTTCTTTTTTAGCGGCTTCATTTATGCTGTTGATACCATTCTCATTGGTATTTCAATTCATGACAAAT
AAAATCTATAATGTAGATTTTATTTTAAGCAGATTAAGGTACTATGGCTTTTTAGCTCTAACGCCAACAATTATTCTAAT
CTCTACAATTGAATTAATTAGTAGTCCTGATAGTGATTTTTATAGTGTTAAACTAACCTTTTTAATTTATATTATCATGT
TGGCGGTCTTTTATTATAAAGAAGTACTTGATTTCAGATTTAGATTAAAAAGGGTCTCAGAAAAATTCAATTATCAAGAC
AGTATATATAAATTCACGCAGATGATAAGAGACTCTACTTCCCTATCTCAAGTATTTGAAGAACTGAAAAATACTATACT
TGAGGTTTCTCTTGTTAGCCGAGCACATGTATATGAAGTTTCAGCTGACGGAAATATTAAACTATATGATGATGAGAACG
TAAATTCATTTGAAAAAGTCTATCAAAAAGAATTTAGAAAAGTAACATCCGAAATAGGGAAAATCGTTGAATTTAATAAA
GGCTTTGTCATGAAAATAGGTGAACGCGGTGGTAAATCATTTGTGATCCTTTGTTTATCTAAAATGAATACGCCTCGTCT
CACACTCGAAGAACTTTCTTGGCTGAAAACTTTGGCTTTTTATACAAACGTATCGATCGAAAACGTCATGAAAATCGAAG
AACTGATGAGTCATTTAGAAGAAATAAAACAACAAGAATCCAACCCCGTATGGCTCAAAAAACTCATGTACACGATCGAG
GAAAAACAACGCTCGGATCTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGATTTGATTTCCTTAAAACGCCAGTGTGA
GCTGTTTTTGGGTGATTTCAAGAAGGATGATAATCCGTGCCGTGAAGAGGTGCAGGACAAGCTTGTACAGATGAATGAGC
AGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGCGGCCGCAGCTTCTGTATGATCTCGGATTGGTG
AAGGCGCTGTCGAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCACATTCGTTTAAATACCGGGAGATTTACGGC
TTCCCTTGATCTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTAATGCGGTCAAGCACTCTCAGG
CGACGGATGTGCTGATTATGCTCATCAGTATTCAAAACAAAATCGTTCTTCATTATGAGGACGATGGCGTTGGGTTTGAT
CAGGAAAAGAATACTGAGCATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGCTTTAGATGGGCGCCT
TCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

59.067

100

0.596


Multiple sequence alignment