Detailed information NTG0398002

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: HQ939_RS05650
• Genome accession: NZ_CP054198
• Coordinates: 1116626..1119454 (-)
• Length: 942 a.a.
• NCBI ID: WP_075606454.1
• Uniprot ID: -
• Organism: Glaesserella parasuis strain YHP170504
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1111626..1124454

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HQ939_RS05645 (HQ939_05655)	-	1116162..1116542 (-)	381	WP_010786782.1	YacL family protein	-
HQ939_RS05650 (HQ939_05660)	uvrA	1116626..1119454 (-)	2829	WP_075606454.1	excinuclease ABC subunit UvrA	Machinery gene
HQ939_RS05655 (HQ939_05665)	ssb	1119757..1120275 (+)	519	WP_021110692.1	single-stranded DNA-binding protein	Machinery gene
HQ939_RS05660 (HQ939_05670)	-	1120428..1121915 (-)	1488	WP_062923800.1	helicase HerA-like C-terminal domain-containing protein	-
HQ939_RS05665 (HQ939_05675)	rhlB	1121925..1123145 (-)	1221	WP_075606453.1	ATP-dependent RNA helicase RhlB	-
HQ939_RS05670 (HQ939_05680)	-	1123209..1123481 (-)	273	WP_005712616.1	HigA family addiction module antitoxin	-
HQ939_RS05675 (HQ939_05685)	-	1123492..1123770 (-)	279	WP_005712614.1	type II toxin-antitoxin system RelE/ParE family toxin	-

Sequence

Protein

• Length: 942 a.a.
• Molecular weight: 104366.88 Da
• Isoelectric Point: 6.7392

>NTDB_id=398002 HQ939_RS05650 WP_075606454.1 1116626..1119454(-) (uvrA) [Glaesserella parasuis strain YHP170504]
MQHIDIRGARTHNLKNVNLVLPRDKFIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLS
PAISIEQKSTSHNPRSTVGTVTEIHDYLRLLFARVGEPRCPDHDVPLAAQTISQMVDRVLEEPEGKRLMLLSPVVKGRKG
EHAKLLENLTANGYIRARIDGEICDLSDPPKLELQKKHTIEVVIDRFKVRSDIATRLAESFETALELSGSTAIIADMDDP
NAEELVFSSSFACSHCGYSLTELEPRLFSFNNPAGACPTCDGLGVQQYFDERKVVQNPDVSLASGAIKGWDRRSFYYFGL
LKSVAKHYDFDIEMPFNQLPKKIQNIILNGSKDEIEFVYVNDRGDSVKRVHAFEGVLNNMARRYKETESNAVREELAKYI
NNRTCTDCEGSRLRREARYVFLEKTNLPMVSEKSIGEALEFFEGLHLSGQKAQIAEKILKEIRERLSFLVNVGLNYLSLS
RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLNTLIHLRNLGNTVIVVEHDEDAIMAADHIVDIG
PGAGVHGGQIIAQGTAQEIMQNEASITGKFLSGKEKIEIPKQRTPRDESKQLVLKGASGNNLKEVDLAIPIGLFTCITGV
SGSGKSTLINDTLFPIAQNALNRAENSDVAPYKSIDGLAHFDKVIDINQSPIGRTPRSNPATYTGLFTPIRELFAGTQEA
RARGYTVGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDHCKGKRYNRETLEIRYKGKTIHQVLDMTVEEAREFFD
AVPMIARKLQTLIDVGLSYIRLGQSSTTLSGGEAQRVKLAAELSKRDTGKTLYILDEPTTGLHFADIKQLLTVLHRLRDQ
GNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGQIIAEGTPEEVAKDKKSHTARFLKEILKKG

Nucleotide

• Length: 2829 bp

>NTDB_id=398002 HQ939_RS05650 WP_075606454.1 1116626..1119454(-) (uvrA) [Glaesserella parasuis strain YHP170504]
ATGCAACATATTGATATTCGTGGGGCGAGAACCCACAATTTAAAAAACGTGAATTTGGTTCTTCCGAGAGATAAATTTAT
TGTGATTACAGGGTTGTCAGGGTCAGGCAAATCGTCTTTGGCTTTTGATACCCTTTATGCTGAAGGGCAACGTCGTTATG
TGGAAAGTTTATCCGCTTATGCTCGCCAGTTCTTGTCTTTGATGGAAAAGCCTGATGTCGATCATATTGAAGGGCTTTCC
CCTGCGATTTCAATTGAGCAGAAATCTACCTCGCACAATCCTCGTTCTACGGTGGGAACGGTGACGGAAATCCACGATTA
TTTGCGTTTGTTGTTTGCCCGTGTGGGCGAGCCTCGCTGTCCTGATCACGATGTGCCGTTAGCGGCTCAGACGATTTCGC
AAATGGTGGATAGAGTGCTGGAAGAACCTGAAGGTAAGCGTTTGATGTTGCTTTCTCCTGTGGTGAAAGGTCGTAAAGGT
GAACACGCAAAATTATTAGAAAATCTGACCGCTAATGGCTATATCCGTGCCAGAATTGATGGGGAAATTTGTGATCTGTC
CGATCCGCCAAAACTTGAATTGCAGAAAAAACATACGATTGAAGTGGTGATTGATCGTTTTAAAGTGCGTAGCGATATTG
CGACCCGTTTAGCCGAGTCCTTTGAAACGGCATTGGAGCTCTCAGGTTCAACAGCGATTATTGCCGATATGGACGATCCA
AATGCAGAAGAGTTAGTGTTTTCGTCGAGTTTTGCTTGCTCTCACTGTGGCTATTCGCTGACAGAACTAGAACCACGCCT
TTTCTCGTTTAATAATCCTGCTGGGGCTTGCCCAACTTGTGATGGTTTGGGAGTTCAGCAATATTTTGATGAACGTAAAG
TGGTGCAAAACCCTGATGTGTCTTTAGCAAGCGGTGCGATTAAGGGCTGGGACCGCCGTAGTTTCTACTATTTCGGTTTG
TTGAAATCAGTGGCGAAACATTATGATTTTGATATTGAAATGCCGTTTAATCAGTTACCGAAGAAAATTCAAAATATCAT
TTTAAATGGTTCAAAAGATGAAATTGAATTTGTCTATGTGAATGATCGAGGTGATAGCGTTAAGCGAGTTCACGCTTTTG
AAGGGGTGCTGAATAATATGGCTCGTCGTTATAAGGAAACCGAGTCAAATGCAGTGCGTGAAGAGCTGGCTAAATATATT
AATAATCGTACTTGTACCGATTGTGAAGGCTCTCGTTTACGTCGTGAAGCCCGTTATGTCTTTTTAGAGAAAACCAACTT
GCCGATGGTGTCGGAAAAAAGTATCGGCGAAGCCTTAGAATTTTTTGAAGGCTTACATCTATCTGGGCAGAAAGCACAAA
TTGCGGAAAAAATTCTCAAAGAGATCCGTGAGCGTTTGTCTTTCCTTGTCAATGTTGGGTTGAACTACCTTTCGCTCTCT
CGTTCGGCAGAAACCTTATCAGGTGGTGAAGCTCAACGTATTCGCCTTGCCAGCCAAATCGGTGCAGGGTTAGTGGGAGT
GATGTACGTGCTTGATGAACCGTCTATTGGCTTGCACCAACGAGATAATGAACGTTTACTAAACACGCTTATTCATCTTC
GGAATTTGGGTAATACCGTGATTGTGGTTGAACACGATGAAGATGCGATTATGGCGGCGGATCATATTGTCGATATTGGA
CCAGGGGCAGGGGTACACGGTGGGCAGATTATTGCTCAGGGTACGGCTCAAGAAATTATGCAAAATGAAGCATCGATTAC
GGGCAAATTCTTATCGGGTAAGGAAAAAATCGAGATCCCGAAACAGCGTACCCCACGAGATGAAAGCAAACAGCTGGTGT
TAAAAGGGGCGAGCGGTAATAACTTGAAAGAAGTCGATTTAGCTATTCCTATCGGTCTGTTTACTTGTATTACGGGGGTA
TCGGGTTCGGGCAAATCCACCTTAATTAACGATACCTTATTCCCGATTGCTCAAAATGCGTTAAACCGTGCAGAAAACAG
CGATGTCGCCCCTTATAAGAGCATTGACGGATTGGCTCATTTCGACAAAGTGATCGACATCAATCAAAGCCCGATTGGAC
GTACGCCACGTTCAAACCCTGCGACTTATACAGGTTTATTTACCCCGATTCGTGAACTCTTTGCTGGTACACAAGAAGCA
AGAGCAAGGGGCTATACTGTCGGGCGTTTCAGTTTTAACGTACGTGGCGGACGTTGTGAAGCCTGCCAAGGTGACGGGGT
GATCAAAGTTGAAATGCACTTCTTACCTGATGTATATGTGCCGTGCGACCACTGTAAAGGCAAACGCTATAACCGTGAAA
CCCTTGAAATTCGCTATAAAGGCAAAACCATTCATCAAGTGTTAGATATGACTGTGGAAGAAGCTCGTGAGTTTTTTGAT
GCCGTGCCGATGATTGCACGTAAGCTACAAACTTTAATAGACGTAGGCTTATCCTATATCCGTTTAGGGCAATCTTCTAC
CACCCTGTCAGGTGGCGAAGCTCAGCGGGTGAAACTGGCAGCGGAATTATCCAAACGTGACACGGGCAAAACCCTCTATA
TTCTTGATGAACCAACGACAGGATTACACTTCGCCGACATTAAACAATTATTGACCGTATTGCACCGCTTGCGTGATCAA
GGAAATACCATTGTGGTGATCGAGCATAACTTAGATGTGATCAAAACGGCAGACTGGATTGTCGATCTAGGTCCTGAAGG
CGGTAGCGGTGGCGGACAGATTATCGCCGAAGGTACGCCTGAAGAGGTGGCAAAAGATAAGAAATCCCATACGGCAAGAT
TTTTAAAAGAGATTTTGAAGAAAGGTTAA

Domains

Predicted by InterProScan.

• UvrA DNA-binding domain (UvrA_DNA-bind) (290-398)

• UvrA interaction domain (UvrA_inter) (130-237)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	57.082	99.682	0.569
uvrA	Streptococcus pneumoniae TIGR4	57.082	99.682	0.569
uvrA	Streptococcus pneumoniae D39	57.082	99.682	0.569