Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | GII81_RS13415 | Genome accession | NZ_CP045820 |
| Coordinates | 2581608..2581943 (+) | Length | 111 a.a. |
| NCBI ID | WP_003226345.1 | Uniprot ID | A0AAE2VGU9 |
| Organism | Bacillus subtilis strain MB9_B1 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2576608..2586943
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GII81_RS13395 (GII81_13395) | gcvT | 2577201..2578289 (-) | 1089 | WP_015714248.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| GII81_RS13400 (GII81_13400) | hepAA | 2578730..2580403 (+) | 1674 | WP_029726726.1 | SNF2-related protein | - |
| GII81_RS13405 (GII81_13405) | yqhG | 2580424..2581218 (+) | 795 | WP_015714249.1 | YqhG family protein | - |
| GII81_RS13410 (GII81_13410) | sinI | 2581401..2581574 (+) | 174 | WP_003230187.1 | anti-repressor SinI | Regulator |
| GII81_RS13415 (GII81_13415) | sinR | 2581608..2581943 (+) | 336 | WP_003226345.1 | transcriptional regulator SinR | Regulator |
| GII81_RS13420 (GII81_13420) | tasA | 2582036..2582821 (-) | 786 | WP_014664586.1 | biofilm matrix protein TasA | - |
| GII81_RS13425 (GII81_13425) | sipW | 2582885..2583457 (-) | 573 | WP_072692741.1 | signal peptidase I SipW | - |
| GII81_RS13430 (GII81_13430) | tapA | 2583441..2584202 (-) | 762 | WP_029726724.1 | amyloid fiber anchoring/assembly protein TapA | - |
| GII81_RS13435 (GII81_13435) | yqzG | 2584474..2584800 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| GII81_RS13440 (GII81_13440) | spoIITA | 2584842..2585021 (-) | 180 | WP_029726723.1 | YqzE family protein | - |
| GII81_RS13445 (GII81_13445) | comGG | 2585093..2585467 (-) | 375 | WP_029726722.1 | ComG operon protein ComGG | Machinery gene |
| GII81_RS13450 (GII81_13450) | comGF | 2585468..2585851 (-) | 384 | WP_029726721.1 | ComG operon protein ComGF | Machinery gene |
| GII81_RS13455 (GII81_13455) | comGE | 2585877..2586224 (-) | 348 | WP_014480255.1 | ComG operon protein 5 | Machinery gene |
| GII81_RS13460 (GII81_13460) | comGD | 2586208..2586639 (-) | 432 | WP_029726720.1 | comG operon protein ComGD | Machinery gene |
| GII81_RS13465 (GII81_13465) | comGC | 2586629..2586925 (-) | 297 | WP_029726719.1 | comG operon protein ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12988.64 Da Isoelectric Point: 7.2023
>NTDB_id=397981 GII81_RS13415 WP_003226345.1 2581608..2581943(+) (sinR) [Bacillus subtilis strain MB9_B1]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
Nucleotide
Download Length: 336 bp
>NTDB_id=397981 GII81_RS13415 WP_003226345.1 2581608..2581943(+) (sinR) [Bacillus subtilis strain MB9_B1]
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |