Detailed information    

insolico Bioinformatically predicted

Overview

Name   comGG   Type   Machinery gene
Locus tag   BSN5_RS02855 Genome accession   NC_014976
Coordinates   535276..535650 (-) Length   124 a.a.
NCBI ID   WP_015714252.1    Uniprot ID   -
Organism   Bacillus subtilis BSn5     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 530276..540650
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSN5_RS02815 (BSn5_02845) yqhG 530608..531402 (+) 795 WP_015714249.1 YqhG family protein -
  BSN5_RS02820 (BSn5_02850) sinI 531585..531758 (+) 174 WP_003230187.1 anti-repressor SinI Regulator
  BSN5_RS02825 (BSn5_02855) sinR 531792..532127 (+) 336 WP_003226345.1 transcriptional regulator SinR Regulator
  BSN5_RS02830 (BSn5_02860) tasA 532220..533005 (-) 786 WP_015714250.1 biofilm matrix protein TasA -
  BSN5_RS02835 (BSn5_02865) sipW 533069..533641 (-) 573 WP_003230181.1 signal peptidase I SipW -
  BSN5_RS02840 (BSn5_02870) tapA 533625..534386 (-) 762 WP_015714251.1 amyloid fiber anchoring/assembly protein TapA -
  BSN5_RS02845 (BSn5_02875) yqzG 534658..534984 (+) 327 WP_003246051.1 YqzG/YhdC family protein -
  BSN5_RS02850 (BSn5_02880) spoIITA 535026..535205 (-) 180 WP_014480252.1 YqzE family protein -
  BSN5_RS02855 (BSn5_02885) comGG 535276..535650 (-) 375 WP_015714252.1 ComG operon protein ComGG Machinery gene
  BSN5_RS02860 (BSn5_02890) comGF 535651..536034 (-) 384 WP_038429292.1 ComG operon protein ComGF Machinery gene
  BSN5_RS02865 (BSn5_02895) comGE 536060..536407 (-) 348 WP_015714254.1 ComG operon protein 5 Machinery gene
  BSN5_RS02870 (BSn5_02900) comGD 536391..536822 (-) 432 WP_015714255.1 comG operon protein ComGD Machinery gene
  BSN5_RS02875 (BSn5_02905) comGC 536812..537108 (-) 297 WP_015714256.1 comG operon protein ComGC Machinery gene
  BSN5_RS02880 (BSn5_02910) comGB 537122..538159 (-) 1038 WP_015714257.1 comG operon protein ComGB Machinery gene
  BSN5_RS02885 (BSn5_02915) comGA 538146..539216 (-) 1071 WP_015714258.1 competence protein ComGA Machinery gene
  BSN5_RS02895 (BSn5_02920) - 539428..539625 (-) 198 WP_014480259.1 CBS domain-containing protein -
  BSN5_RS02900 (BSn5_02925) corA 539627..540580 (-) 954 WP_004399136.1 magnesium transporter CorA -

Sequence

Protein


Download         Length: 124 a.a.        Molecular weight: 14524.73 Da        Isoelectric Point: 8.7849

>NTDB_id=39739 BSN5_RS02855 WP_015714252.1 535276..535650(-) (comGG) [Bacillus subtilis BSn5]
MYRTRGFIYPAILFVSALVLLIVNFAAAQYISRCMFEKETKELYIGENLLQNGVLLSIRHVLEERKGQEGTEQFPYGRVS
YYIHDTSIKEQKEINLRVSTESGTERTAQIVFDQKQKKLLRWTE

Nucleotide


Download         Length: 375 bp        

>NTDB_id=39739 BSN5_RS02855 WP_015714252.1 535276..535650(-) (comGG) [Bacillus subtilis BSn5]
ATGTATCGTACAAGAGGGTTTATTTATCCAGCAATTCTTTTTGTGTCAGCGCTTGTGCTGTTAATCGTGAACTTTGCTGC
TGCTCAATATATTTCACGCTGCATGTTTGAGAAGGAAACAAAAGAGTTATACATAGGAGAGAATTTGCTTCAAAATGGGG
TGCTTCTTTCGATTCGGCATGTTCTAGAGGAACGGAAAGGCCAGGAGGGGACGGAGCAATTTCCATATGGACGGGTTTCT
TATTACATTCATGATACATCGATAAAAGAACAAAAAGAAATCAACTTAAGAGTGTCAACGGAGTCGGGAACAGAAAGAAC
TGCACAGATCGTGTTTGACCAAAAACAGAAAAAGCTGCTGAGATGGACAGAATAA

Domains

Predicted by InterproScan.

ComG operon protein 7 (ComGG)

(30-124)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGG Bacillus subtilis subsp. subtilis str. 168

95.968

100

0.96

Multiple sequence alignment