Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | BSN5_RS02880 | Genome accession | NC_014976 |
| Coordinates | 537122..538159 (-) | Length | 345 a.a. |
| NCBI ID | WP_015714257.1 | Uniprot ID | - |
| Organism | Bacillus subtilis BSn5 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 532122..543159
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BSN5_RS02830 (BSn5_02860) | tasA | 532220..533005 (-) | 786 | WP_015714250.1 | biofilm matrix protein TasA | - |
| BSN5_RS02835 (BSn5_02865) | sipW | 533069..533641 (-) | 573 | WP_003230181.1 | signal peptidase I SipW | - |
| BSN5_RS02840 (BSn5_02870) | tapA | 533625..534386 (-) | 762 | WP_015714251.1 | amyloid fiber anchoring/assembly protein TapA | - |
| BSN5_RS02845 (BSn5_02875) | yqzG | 534658..534984 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| BSN5_RS02850 (BSn5_02880) | spoIITA | 535026..535205 (-) | 180 | WP_014480252.1 | YqzE family protein | - |
| BSN5_RS02855 (BSn5_02885) | comGG | 535276..535650 (-) | 375 | WP_015714252.1 | ComG operon protein ComGG | Machinery gene |
| BSN5_RS02860 (BSn5_02890) | comGF | 535651..536034 (-) | 384 | WP_038429292.1 | ComG operon protein ComGF | Machinery gene |
| BSN5_RS02865 (BSn5_02895) | comGE | 536060..536407 (-) | 348 | WP_015714254.1 | ComG operon protein 5 | Machinery gene |
| BSN5_RS02870 (BSn5_02900) | comGD | 536391..536822 (-) | 432 | WP_015714255.1 | comG operon protein ComGD | Machinery gene |
| BSN5_RS02875 (BSn5_02905) | comGC | 536812..537108 (-) | 297 | WP_015714256.1 | comG operon protein ComGC | Machinery gene |
| BSN5_RS02880 (BSn5_02910) | comGB | 537122..538159 (-) | 1038 | WP_015714257.1 | comG operon protein ComGB | Machinery gene |
| BSN5_RS02885 (BSn5_02915) | comGA | 538146..539216 (-) | 1071 | WP_015714258.1 | competence protein ComGA | Machinery gene |
| BSN5_RS02895 (BSn5_02920) | - | 539428..539625 (-) | 198 | WP_014480259.1 | CBS domain-containing protein | - |
| BSN5_RS02900 (BSn5_02925) | corA | 539627..540580 (-) | 954 | WP_004399136.1 | magnesium transporter CorA | - |
| BSN5_RS02905 (BSn5_02930) | yqhB | 540723..542051 (+) | 1329 | WP_015714259.1 | hemolysin family protein | - |
| BSN5_RS02910 (BSn5_02935) | rsbRD | 542104..542940 (-) | 837 | WP_015714260.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39733.22 Da Isoelectric Point: 9.7900
>NTDB_id=39744 BSN5_RS02880 WP_015714257.1 537122..538159(-) (comGB) [Bacillus subtilis BSn5]
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDTVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGKSIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDTVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGKSIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=39744 BSN5_RS02880 WP_015714257.1 537122..538159(-) (comGB) [Bacillus subtilis BSn5]
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCCAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATACGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCAATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACTTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTAAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTCGTTAAAGGATCAAGCCAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATACGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCAATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACTTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTAAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
99.071 |
93.623 |
0.928 |