Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | GH771_RS15035 | Genome accession | NZ_CP045769 |
| Coordinates | 3235387..3235917 (-) | Length | 176 a.a. |
| NCBI ID | WP_006177466.1 | Uniprot ID | A0AAE4E8Q4 |
| Organism | Enterobacter cancerogenus strain MiY-F | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 3230387..3240917
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GH771_RS15015 (GH771_15015) | - | 3230742..3230990 (+) | 249 | WP_006177462.1 | hypothetical protein | - |
| GH771_RS15020 (GH771_15020) | - | 3231468..3232973 (+) | 1506 | WP_153689091.1 | sensor domain-containing diguanylate cyclase | - |
| GH771_RS15025 (GH771_15025) | - | 3233040..3233804 (+) | 765 | WP_153689092.1 | EAL domain-containing protein | - |
| GH771_RS15030 (GH771_15030) | - | 3233816..3235342 (+) | 1527 | WP_153689093.1 | EAL domain-containing protein | - |
| GH771_RS15035 (GH771_15035) | ssb | 3235387..3235917 (-) | 531 | WP_006177466.1 | single-stranded DNA-binding protein SSB1 | Machinery gene |
| GH771_RS15040 (GH771_15040) | uvrA | 3236164..3238989 (+) | 2826 | WP_006177467.1 | excinuclease ABC subunit UvrA | - |
| GH771_RS15045 (GH771_15045) | - | 3238990..3239343 (-) | 354 | WP_006177468.1 | MmcQ/YjbR family DNA-binding protein | - |
| GH771_RS15050 (GH771_15050) | - | 3239346..3239762 (-) | 417 | WP_006177469.1 | secondary thiamine-phosphate synthase enzyme YjbQ | - |
| GH771_RS15055 (GH771_15055) | aphA | 3239876..3240589 (-) | 714 | WP_088209305.1 | acid phosphatase AphA | - |
Sequence
Protein
Download Length: 176 a.a. Molecular weight: 18835.84 Da Isoelectric Point: 5.2456
>NTDB_id=397001 GH771_RS15035 WP_006177466.1 3235387..3235917(-) (ssb) [Enterobacter cancerogenus strain MiY-F]
MASRGVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVAGEYLRKGSQVYI
EGQLRTRKWTDQSGAEKYTTEVVVNVGGTMQMLGGRQGGGAPAGGGQNQQQGGWGQPQQPQGGNQFSGGAQSRPQQQSAP
APSNEPPMDFDDDIPF
MASRGVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVAGEYLRKGSQVYI
EGQLRTRKWTDQSGAEKYTTEVVVNVGGTMQMLGGRQGGGAPAGGGQNQQQGGWGQPQQPQGGNQFSGGAQSRPQQQSAP
APSNEPPMDFDDDIPF
Nucleotide
Download Length: 531 bp
>NTDB_id=397001 GH771_RS15035 WP_006177466.1 3235387..3235917(-) (ssb) [Enterobacter cancerogenus strain MiY-F]
ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGCCAGGACCCGGAAGTACGCTACATGCCGAGTGG
TGGCGCAGTTGCCAACATTACGCTGGCTACGTCCGAATCCTGGCGTGATAAAGCGACCGGTGAGATGAAAGAGCAGACTG
AATGGCACCGCGTTGTGCTGTTTGGCAAACTGGCTGAAGTGGCTGGTGAATATCTGCGTAAGGGTTCTCAGGTCTATATC
GAAGGCCAGCTGCGTACCCGCAAATGGACCGATCAGTCCGGTGCCGAGAAGTACACCACTGAAGTGGTGGTAAACGTTGG
TGGCACCATGCAGATGCTGGGTGGCCGTCAGGGCGGTGGCGCACCGGCAGGTGGCGGCCAGAACCAGCAGCAGGGCGGTT
GGGGTCAGCCTCAGCAGCCACAGGGTGGCAACCAGTTCAGCGGCGGCGCGCAGTCTCGTCCGCAGCAGCAGTCCGCACCG
GCACCGTCTAACGAACCGCCAATGGACTTCGACGACGACATCCCGTTCTAA
ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGCCAGGACCCGGAAGTACGCTACATGCCGAGTGG
TGGCGCAGTTGCCAACATTACGCTGGCTACGTCCGAATCCTGGCGTGATAAAGCGACCGGTGAGATGAAAGAGCAGACTG
AATGGCACCGCGTTGTGCTGTTTGGCAAACTGGCTGAAGTGGCTGGTGAATATCTGCGTAAGGGTTCTCAGGTCTATATC
GAAGGCCAGCTGCGTACCCGCAAATGGACCGATCAGTCCGGTGCCGAGAAGTACACCACTGAAGTGGTGGTAAACGTTGG
TGGCACCATGCAGATGCTGGGTGGCCGTCAGGGCGGTGGCGCACCGGCAGGTGGCGGCCAGAACCAGCAGCAGGGCGGTT
GGGGTCAGCCTCAGCAGCCACAGGGTGGCAACCAGTTCAGCGGCGGCGCGCAGTCTCGTCCGCAGCAGCAGTCCGCACCG
GCACCGTCTAACGAACCGCCAATGGACTTCGACGACGACATCCCGTTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
76.667 |
100 |
0.784 |
| ssb | Glaesserella parasuis strain SC1401 |
56.216 |
100 |
0.591 |
| ssb | Neisseria meningitidis MC58 |
46.629 |
100 |
0.472 |
| ssb | Neisseria gonorrhoeae MS11 |
46.629 |
100 |
0.472 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
35.556 |
100 |
0.364 |