Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   FOC71_RS03360 Genome accession   NZ_CP053999
Coordinates   632156..634489 (+) Length   777 a.a.
NCBI ID   WP_003074632.1    Uniprot ID   -
Organism   Streptococcus intermedius strain FDAARGOS_769     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 627156..639489
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOC71_RS03340 (FOC71_03340) lepB 629652..630266 (-) 615 WP_003074639.1 signal peptidase I -
  FOC71_RS03345 (FOC71_03345) rnhC 630270..631160 (-) 891 WP_003074637.1 ribonuclease HIII -
  FOC71_RS03350 (FOC71_03350) - 631246..631551 (+) 306 WP_003074635.1 hypothetical protein -
  FOC71_RS03355 (FOC71_03355) - 631548..632096 (+) 549 WP_003070931.1 CvpA family protein -
  FOC71_RS03360 (FOC71_03360) mutS/mutS2 632156..634489 (+) 2334 WP_003074632.1 endonuclease MutS2 Machinery gene
  FOC71_RS03365 (FOC71_03365) - 634551..635969 (+) 1419 WP_003074631.1 C69 family dipeptidase -
  FOC71_RS03370 (FOC71_03370) trxA 636074..636388 (+) 315 WP_003074629.1 thioredoxin -
  FOC71_RS03375 (FOC71_03375) - 636549..637067 (-) 519 WP_003074627.1 DUF4865 family protein -
  FOC71_RS03380 (FOC71_03380) - 637176..637922 (+) 747 WP_003074625.1 LysR family transcriptional regulator -
  FOC71_RS03385 (FOC71_03385) - 638023..638430 (+) 408 WP_003074623.1 polyketide cyclase -
  FOC71_RS03390 (FOC71_03390) trxA 638520..638834 (+) 315 WP_003074621.1 thioredoxin -

Sequence

Protein


Download         Length: 777 a.a.        Molecular weight: 87669.36 Da        Isoelectric Point: 6.3128

>NTDB_id=397001 FOC71_RS03360 WP_003074632.1 632156..634489(+) (mutS/mutS2) [Streptococcus intermedius strain FDAARGOS_769]
MNRKILETLEFGKIKALFEPYLLTEQGRLELGQLFPSNKQERLETAFLEMTDMQQIFVQRPHFSLAATQDITGLTKRLEL
EGDLNIEEFLALKRILTVTQELTDFYDKLENVDLQRLNRLFEKLLAFPNLQGLLQAINEGGFVESFASDNLARIRRKIQE
NEVQVRDILQDILKTKGDMLVDQVVASRNGRNVLPVKNTFRNRISGVVHDISASGNTVYIEPRAVVNLNEEITNAQADER
HEILRILQELSDRIRPHIAEIANNAWIIGHLDLVRAKVCFMQERGAVVPMLSDSKDIRLLHVTHPLIENAVANDLYFASD
LTEIVITGPNTGGKTIMLKTLGLAQLMAQSGLPILADNGSRVGIFDQIFADIGDEQSIEQSLSTFSSHMTNIVAILEQVD
ENALVLLDELGAGTDPQEGAALAMAILEDLRLRQVKTMATTHYPELKAYGIEMAGVQNASMEFDTASLRPTYRFMQGVPG
RSNALEIARRLGLSELVVRHAQEQTNTDSDVNRIIERLEEQTLESRKRLDNIREVEQENLKFNRALKKLYNEFNRERETE
LNKARLEAQEIVDLALSESESILKNLHDKSSLKPHEIIEAKAQLKKLAPETVDLSKNKVLKQAKKNRAPKVGDDILVTSY
GQRGTLVKQLKDGRWEAQVGLIKMTLEEQEFNLLKAEKEQQPKRKQVNVVKRTTTSGPRARLDLRGKRYEEAMQELDAFI
DQALLNNMAQVDIIHGIGTGVIREGVTKYLRRNKHVKSFGYAPQNAGGSGATIVVFK

Nucleotide


Download         Length: 2334 bp        

>NTDB_id=397001 FOC71_RS03360 WP_003074632.1 632156..634489(+) (mutS/mutS2) [Streptococcus intermedius strain FDAARGOS_769]
ATGAATAGAAAAATTTTAGAAACATTAGAATTTGGGAAAATCAAGGCACTCTTTGAACCCTATCTGTTAACAGAACAAGG
CCGTTTAGAGCTAGGACAGCTTTTTCCATCTAATAAACAGGAACGGTTGGAGACAGCATTTTTAGAAATGACGGACATGC
AGCAGATTTTTGTGCAACGTCCGCATTTCAGCTTGGCTGCGACTCAAGACATTACTGGACTGACCAAGCGTTTGGAGCTG
GAAGGCGACTTAAATATTGAAGAATTTCTTGCTCTGAAGCGTATTTTAACTGTCACGCAAGAATTAACTGATTTCTATGA
TAAGTTGGAAAATGTTGATTTGCAACGCTTGAACCGTCTTTTTGAAAAATTATTGGCTTTTCCTAACCTGCAAGGATTAC
TGCAAGCTATCAATGAGGGCGGATTTGTCGAAAGCTTTGCGAGTGACAATTTAGCTCGCATTCGTCGGAAAATTCAAGAA
AATGAAGTTCAAGTGAGAGATATTTTGCAAGATATTCTCAAAACGAAGGGCGATATGTTGGTAGATCAAGTAGTAGCTAG
TCGAAATGGTCGCAATGTTTTGCCAGTTAAAAATACATTTCGTAATCGGATTTCAGGCGTGGTACATGATATTTCTGCTA
GTGGAAATACAGTATATATCGAGCCGAGGGCAGTAGTCAACCTCAACGAAGAAATCACCAATGCACAGGCAGACGAGCGT
CATGAGATTCTACGTATCTTGCAAGAGTTGTCCGACCGAATACGTCCTCATATTGCTGAAATTGCTAATAACGCTTGGAT
TATTGGACATTTGGATCTAGTTCGGGCAAAAGTGTGTTTTATGCAGGAGAGAGGCGCGGTGGTGCCGATGCTGTCTGATA
GTAAGGATATTCGCCTGCTCCATGTTACTCATCCCTTGATAGAAAATGCAGTGGCTAATGATTTGTACTTTGCATCGGAT
TTAACGGAAATCGTCATTACTGGTCCTAACACAGGTGGGAAGACAATTATGCTGAAGACCTTGGGCTTGGCTCAGCTCAT
GGCGCAGTCTGGTCTGCCTATTTTGGCGGATAATGGTAGTCGAGTGGGGATTTTTGACCAAATTTTTGCCGACATCGGAG
ATGAGCAGTCTATTGAGCAGAGCTTATCGACTTTCTCTAGCCACATGACTAATATTGTTGCCATTTTAGAGCAGGTAGAC
GAAAATGCTCTGGTACTTCTGGATGAGCTTGGAGCTGGAACCGACCCGCAGGAGGGTGCAGCTCTTGCGATGGCAATCCT
TGAAGACCTGCGGCTGCGGCAGGTCAAGACAATGGCAACGACTCATTACCCAGAGCTTAAGGCTTATGGGATTGAAATGG
CTGGCGTACAAAATGCTAGCATGGAGTTTGATACGGCAAGTCTAAGACCAACTTATCGCTTTATGCAGGGGGTGCCAGGG
CGTTCTAATGCCCTTGAAATTGCTCGCCGTTTGGGCTTGTCGGAACTTGTCGTTCGCCATGCCCAAGAGCAGACCAACAC
GGACAGCGATGTCAATCGGATCATTGAGAGACTGGAGGAGCAAACGCTGGAAAGCCGCAAGCGCTTAGACAATATCCGTG
AGGTTGAGCAGGAAAATCTCAAATTTAACCGAGCACTCAAAAAACTTTACAATGAGTTTAACCGAGAGAGAGAAACCGAA
CTCAATAAGGCACGGTTGGAAGCTCAGGAAATTGTTGATCTGGCTTTGTCAGAGAGTGAGAGCATTCTCAAAAATCTCCA
TGATAAGTCTAGTCTCAAACCGCATGAGATTATCGAAGCTAAGGCCCAGCTTAAAAAGTTGGCGCCAGAAACCGTTGATT
TATCAAAGAACAAGGTGCTCAAGCAGGCCAAGAAAAATCGTGCGCCCAAGGTGGGAGATGATATTCTGGTGACCAGCTAT
GGTCAGCGAGGGACCTTGGTCAAGCAGCTCAAGGACGGCCGTTGGGAGGCTCAGGTCGGTCTTATCAAGATGACTCTAGA
AGAGCAGGAATTTAATCTTCTAAAGGCTGAAAAGGAGCAGCAGCCTAAGCGCAAGCAGGTCAATGTGGTGAAACGAACAA
CCACAAGCGGACCAAGAGCTAGACTGGATTTGCGAGGCAAGCGTTATGAAGAAGCTATGCAAGAGCTGGACGCCTTTATT
GATCAGGCTCTCCTCAATAACATGGCTCAGGTTGATATTATTCACGGTATCGGGACCGGTGTGATCCGCGAAGGGGTGAC
TAAGTACCTCCGCCGCAACAAGCACGTCAAGTCCTTTGGTTATGCTCCGCAAAATGCCGGTGGCAGCGGTGCGACGATTG
TGGTGTTTAAGTGA

Domains

Predicted by InterProScan.

MutS domain V (MutS_V)

(324-505)

MutS2 and Smr-associated SH3 domain (MSSS)

(631-668)

Smr domain (Smr)

(702-777)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

39.163

100

0.398

Multiple sequence alignment