Detailed information
Bioinformatically predicted
Overview
| Name | comFC/cflB | Type | Machinery gene |
| Locus tag | GE021_RS11335 | Genome accession | NZ_CP053792 |
| Coordinates | 1596146..1596568 (-) | Length | 140 a.a. |
| NCBI ID | WP_003044691.1 | Uniprot ID | - |
| Organism | Streptococcus canis strain HL_77_1 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1591146..1601568
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GE021_RS07870 (GE021_007865) | - | 1594513..1595466 (+) | 954 | Protein_1520 | IS30 family transposase | - |
| GE021_RS07875 (GE021_007870) | raiA | 1595518..1596066 (-) | 549 | WP_003044623.1 | ribosome-associated translation inhibitor RaiA | - |
| GE021_RS11335 | comFC/cflB | 1596146..1596568 (-) | 423 | WP_003044691.1 | ComF family protein | Machinery gene |
| GE021_RS07885 (GE021_007880) | comFA/cflA | 1596783..1598108 (-) | 1326 | WP_093999505.1 | DEAD/DEAH box helicase | Machinery gene |
| GE021_RS07890 (GE021_007885) | - | 1598164..1598796 (+) | 633 | WP_093999506.1 | YigZ family protein | - |
| GE021_RS07895 (GE021_007890) | cysK | 1598914..1599849 (+) | 936 | WP_003044700.1 | cysteine synthase A | - |
| GE021_RS07900 (GE021_007895) | - | 1600016..1600375 (-) | 360 | WP_003044703.1 | S1 RNA-binding domain-containing protein | - |
Sequence
Protein
Download Length: 140 a.a. Molecular weight: 16378.81 Da Isoelectric Point: 9.8594
>NTDB_id=394674 GE021_RS11335 WP_003044691.1 1596146..1596568(-) (comFC/cflB) [Streptococcus canis strain HL_77_1]
MKAYFRQYKFQGDYLLRNVFAQELAEIIYQNYQGYVPVPVPISDKRYQERNFNQVSAILEAGKVRYHQIFEKHDDSRQSS
KTKKERLLTKNSYHLLEGVEIPPKILIVDDIYTTGSTIMALKKQLLQFGNSDIKSLSIAR
MKAYFRQYKFQGDYLLRNVFAQELAEIIYQNYQGYVPVPVPISDKRYQERNFNQVSAILEAGKVRYHQIFEKHDDSRQSS
KTKKERLLTKNSYHLLEGVEIPPKILIVDDIYTTGSTIMALKKQLLQFGNSDIKSLSIAR
Nucleotide
Download Length: 423 bp
>NTDB_id=394674 GE021_RS11335 WP_003044691.1 1596146..1596568(-) (comFC/cflB) [Streptococcus canis strain HL_77_1]
ATGAAAGCCTATTTCAGACAATATAAATTCCAAGGAGACTATTTATTAAGGAATGTCTTTGCTCAGGAATTAGCAGAAAT
CATTTATCAGAACTATCAAGGATATGTCCCTGTCCCAGTACCTATAAGCGACAAACGTTACCAAGAACGGAATTTTAATC
AGGTGAGCGCTATACTTGAAGCTGGTAAAGTTCGTTACCATCAAATTTTTGAAAAACATGATGATAGCCGTCAATCTTCA
AAGACGAAAAAGGAGCGCTTGTTGACTAAAAATTCTTATCATTTACTTGAAGGAGTCGAAATTCCCCCTAAAATCCTCAT
TGTTGATGATATTTATACCACTGGTAGTACCATTATGGCTTTGAAAAAGCAGTTACTACAATTTGGAAATAGTGACATCA
AAAGTTTGTCGATTGCACGTTAA
ATGAAAGCCTATTTCAGACAATATAAATTCCAAGGAGACTATTTATTAAGGAATGTCTTTGCTCAGGAATTAGCAGAAAT
CATTTATCAGAACTATCAAGGATATGTCCCTGTCCCAGTACCTATAAGCGACAAACGTTACCAAGAACGGAATTTTAATC
AGGTGAGCGCTATACTTGAAGCTGGTAAAGTTCGTTACCATCAAATTTTTGAAAAACATGATGATAGCCGTCAATCTTCA
AAGACGAAAAAGGAGCGCTTGTTGACTAAAAATTCTTATCATTTACTTGAAGGAGTCGAAATTCCCCCTAAAATCCTCAT
TGTTGATGATATTTATACCACTGGTAGTACCATTATGGCTTTGAAAAAGCAGTTACTACAATTTGGAAATAGTGACATCA
AAAGTTTGTCGATTGCACGTTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC/cflB | Streptococcus mitis SK321 |
45.714 |
100 |
0.457 |
| comFC/cflB | Streptococcus mitis NCTC 12261 |
45.714 |
100 |
0.457 |
| comFC/cflB | Streptococcus pneumoniae Rx1 |
45.714 |
100 |
0.457 |
| comFC/cflB | Streptococcus pneumoniae D39 |
45.714 |
100 |
0.457 |
| comFC/cflB | Streptococcus pneumoniae R6 |
45.714 |
100 |
0.457 |
| comFC/cflB | Streptococcus pneumoniae TIGR4 |
45.714 |
100 |
0.457 |
| comFC | Lactococcus lactis subsp. cremoris KW2 |
43.972 |
100 |
0.443 |