Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | GEA60_RS01555 | Genome accession | NZ_CP045487 |
| Coordinates | 327936..328460 (+) | Length | 174 a.a. |
| NCBI ID | WP_008503384.1 | Uniprot ID | A0A156LWB5 |
| Organism | Enterobacter cloacae strain 14240244101 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 322936..333460
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GEA60_RS01535 | aphA | 323260..323973 (+) | 714 | WP_050859517.1 | acid phosphatase AphA | - |
| GEA60_RS01540 | - | 324086..324502 (+) | 417 | WP_047360211.1 | secondary thiamine-phosphate synthase enzyme YjbQ | - |
| GEA60_RS01545 | - | 324505..324858 (+) | 354 | WP_014830294.1 | MmcQ/YjbR family DNA-binding protein | - |
| GEA60_RS01550 | uvrA | 324862..327684 (-) | 2823 | WP_014830295.1 | excinuclease ABC subunit UvrA | - |
| GEA60_RS01555 | ssb | 327936..328460 (+) | 525 | WP_008503384.1 | single-stranded DNA-binding protein SSB1 | Machinery gene |
| GEA60_RS01560 | - | 328523..328804 (-) | 282 | WP_008503385.1 | YjcB family protein | - |
| GEA60_RS01565 | - | 329476..331041 (+) | 1566 | WP_043951547.1 | EAL domain-containing protein | - |
| GEA60_RS01570 | soxS | 331048..331374 (-) | 327 | WP_013095071.1 | superoxide response transcriptional regulator SoxS | - |
| GEA60_RS01575 | soxR | 331472..331930 (+) | 459 | WP_013095072.1 | redox-sensitive transcriptional activator SoxR | - |
| GEA60_RS01580 | - | 332245..332916 (+) | 672 | WP_014830297.1 | glutathione S-transferase family protein | - |
Sequence
Protein
Download Length: 174 a.a. Molecular weight: 18593.60 Da Isoelectric Point: 5.2456
>NTDB_id=394544 GEA60_RS01555 WP_008503384.1 327936..328460(+) (ssb) [Enterobacter cloacae strain 14240244101]
MASRGVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVAGEYLRKGSQVYI
EGQLRTRKWTDQSGAEKYTTEVVVNVGGTMQMLGGRQGGGAPAGGGQQQGGWGQPQQPQGGNQFSGGAQSRPQQQSAPAP
SNEPPMDFDDDIPF
MASRGVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVAGEYLRKGSQVYI
EGQLRTRKWTDQSGAEKYTTEVVVNVGGTMQMLGGRQGGGAPAGGGQQQGGWGQPQQPQGGNQFSGGAQSRPQQQSAPAP
SNEPPMDFDDDIPF
Nucleotide
Download Length: 525 bp
>NTDB_id=394544 GEA60_RS01555 WP_008503384.1 327936..328460(+) (ssb) [Enterobacter cloacae strain 14240244101]
ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGCCAGGACCCGGAAGTACGCTACATGCCGAGTGG
TGGTGCAGTTGCCAACATTACGCTGGCTACTTCCGAATCCTGGCGTGACAAAGCGACCGGTGAGATGAAAGAGCAGACCG
AATGGCACCGCGTTGTGCTGTTTGGCAAACTGGCAGAAGTGGCCGGTGAGTACCTGCGTAAAGGTTCTCAGGTTTATATT
GAAGGCCAGTTGCGTACCCGCAAATGGACCGATCAGTCCGGCGCTGAGAAATACACCACTGAAGTGGTGGTAAACGTTGG
CGGCACCATGCAGATGCTGGGTGGCCGTCAGGGCGGTGGCGCACCAGCAGGTGGCGGCCAGCAGCAGGGCGGTTGGGGCC
AGCCTCAGCAGCCACAGGGCGGCAACCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCAGCAGCAATCCGCACCGGCACCG
TCTAACGAACCACCAATGGACTTCGACGACGACATTCCGTTCTGA
ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGCCAGGACCCGGAAGTACGCTACATGCCGAGTGG
TGGTGCAGTTGCCAACATTACGCTGGCTACTTCCGAATCCTGGCGTGACAAAGCGACCGGTGAGATGAAAGAGCAGACCG
AATGGCACCGCGTTGTGCTGTTTGGCAAACTGGCAGAAGTGGCCGGTGAGTACCTGCGTAAAGGTTCTCAGGTTTATATT
GAAGGCCAGTTGCGTACCCGCAAATGGACCGATCAGTCCGGCGCTGAGAAATACACCACTGAAGTGGTGGTAAACGTTGG
CGGCACCATGCAGATGCTGGGTGGCCGTCAGGGCGGTGGCGCACCAGCAGGTGGCGGCCAGCAGCAGGGCGGTTGGGGCC
AGCCTCAGCAGCCACAGGGCGGCAACCAGTTCAGCGGCGGCGCGCAGTCTCGCCCGCAGCAGCAATCCGCACCGGCACCG
TCTAACGAACCACCAATGGACTTCGACGACGACATTCCGTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
76.111 |
100 |
0.787 |
| ssb | Glaesserella parasuis strain SC1401 |
57.377 |
100 |
0.603 |
| ssb | Neisseria meningitidis MC58 |
47.191 |
100 |
0.483 |
| ssb | Neisseria gonorrhoeae MS11 |
47.191 |
100 |
0.483 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
35.556 |
100 |
0.368 |