Detailed information
Bioinformatically predicted
Overview
| Name | comC | Type | Machinery gene |
| Locus tag | HICON_RS03800 | Genome accession | NC_014922 |
| Coordinates | 771845..772366 (+) | Length | 173 a.a. |
| NCBI ID | WP_005662592.1 | Uniprot ID | - |
| Organism | Haemophilus influenzae F3047 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 766845..777366
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HICON_RS03780 (HICON_09740) | - | 766933..767778 (-) | 846 | WP_013527433.1 | 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ | - |
| HICON_RS03785 (HICON_09750) | - | 767851..770445 (-) | 2595 | WP_013527434.1 | penicillin-binding protein 1A | - |
| HICON_RS03790 (HICON_09760) | comA | 770544..771341 (+) | 798 | WP_013527435.1 | pilus assembly protein PilM | Machinery gene |
| HICON_RS03795 (HICON_09770) | comB | 771342..771848 (+) | 507 | WP_006995134.1 | competence protein ComB | Machinery gene |
| HICON_RS03800 | comC | 771845..772366 (+) | 522 | WP_005662592.1 | competence protein ComC | Machinery gene |
| HICON_RS03805 (HICON_09790) | comD | 772363..772776 (+) | 414 | WP_013527437.1 | pilus assembly protein PilP | Machinery gene |
| HICON_RS03810 (HICON_09800) | comE | 772786..774123 (+) | 1338 | WP_013527438.1 | type IV pilus secretin PilQ | Machinery gene |
| HICON_RS03815 (HICON_09810) | - | 774136..774822 (+) | 687 | WP_011272045.1 | ComF family protein | - |
| HICON_RS03820 (HICON_09820) | nfuA | 774898..775494 (+) | 597 | WP_005649300.1 | Fe-S biogenesis protein NfuA | - |
| HICON_RS03825 (HICON_09830) | nudC | 775561..776355 (+) | 795 | WP_005686893.1 | NAD(+) diphosphatase | - |
| HICON_RS03830 (HICON_09840) | - | 776391..776981 (+) | 591 | WP_005686892.1 | YjaG family protein | - |
Sequence
Protein
Download Length: 173 a.a. Molecular weight: 19961.15 Da Isoelectric Point: 10.1286
>NTDB_id=39453 HICON_RS03800 WP_005662592.1 771845..772366(+) (comC) [Haemophilus influenzae F3047]
MKAFFNDPLTPFGKWLSQPFYVHGLTFLLLLSAVIFRPVLDYIEGSSRFHEIENELAVKRSELLHQQKILTSLQQQSESR
KLSPELAAQIIPLNKQIQRLAARNGLSQHLRWEMGQKPILHLQLTGHFEKTKTFLTALLANSSQLSVSRLQFIKPEDSPL
QTEIIFQLDRETK
MKAFFNDPLTPFGKWLSQPFYVHGLTFLLLLSAVIFRPVLDYIEGSSRFHEIENELAVKRSELLHQQKILTSLQQQSESR
KLSPELAAQIIPLNKQIQRLAARNGLSQHLRWEMGQKPILHLQLTGHFEKTKTFLTALLANSSQLSVSRLQFIKPEDSPL
QTEIIFQLDRETK
Nucleotide
Download Length: 522 bp
>NTDB_id=39453 HICON_RS03800 WP_005662592.1 771845..772366(+) (comC) [Haemophilus influenzae F3047]
ATGAAAGCTTTTTTTAACGATCCTTTGACTCCTTTTGGAAAATGGCTAAGTCAGCCTTTTTATGTGCACGGTTTAACCTT
TTTATTGCTATTAAGTGCGGTGATTTTTCGCCCCGTTTTAGATTATATCGAGGGGAGTTCACGTTTCCATGAAATTGAAA
ATGAGTTAGCGGTGAAACGTTCAGAATTGTTGCATCAACAGAAAATTTTAACTTCTTTACAGCAGCAATCGGAAAGTCGA
AAACTTTCTCCAGAACTGGCTGCACAAATTATTCCTTTGAATAAACAAATTCAACGTTTAGCTGCACGCAACGGTTTATC
TCAGCATTTACGTTGGGAAATGGGGCAAAAGCCTATTTTGCATTTACAGCTTACAGGTCATTTTGAGAAAACGAAGACAT
TTTTAACCGCACTTTTGGCTAATTCGTCACAGCTTTCAGTGAGTCGCTTGCAGTTTATCAAACCCGAAGACAGCCCATTG
CAAACCGAGATTATTTTTCAGTTAGATAGGGAGACAAAATGA
ATGAAAGCTTTTTTTAACGATCCTTTGACTCCTTTTGGAAAATGGCTAAGTCAGCCTTTTTATGTGCACGGTTTAACCTT
TTTATTGCTATTAAGTGCGGTGATTTTTCGCCCCGTTTTAGATTATATCGAGGGGAGTTCACGTTTCCATGAAATTGAAA
ATGAGTTAGCGGTGAAACGTTCAGAATTGTTGCATCAACAGAAAATTTTAACTTCTTTACAGCAGCAATCGGAAAGTCGA
AAACTTTCTCCAGAACTGGCTGCACAAATTATTCCTTTGAATAAACAAATTCAACGTTTAGCTGCACGCAACGGTTTATC
TCAGCATTTACGTTGGGAAATGGGGCAAAAGCCTATTTTGCATTTACAGCTTACAGGTCATTTTGAGAAAACGAAGACAT
TTTTAACCGCACTTTTGGCTAATTCGTCACAGCTTTCAGTGAGTCGCTTGCAGTTTATCAAACCCGAAGACAGCCCATTG
CAAACCGAGATTATTTTTCAGTTAGATAGGGAGACAAAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comC | Haemophilus influenzae 86-028NP |
98.266 |
100 |
0.983 |
| comC | Haemophilus influenzae Rd KW20 |
97.11 |
100 |
0.971 |