Detailed information NTG0394468

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: FPL20_RS05305
• Genome accession: NZ_CP045478
• Coordinates: 1007584..1008729 (-)
• Length: 381 a.a.
• NCBI ID: WP_003227549.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain JD-014
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1002584..1013729

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FPL20_RS05280 (FPL20_GE00975)	pbpG	1002837..1004912 (-)	2076	WP_003227540.1	transglycosylase domain-containing protein	-
FPL20_RS05285 (FPL20_GE00976)	speE	1005114..1005944 (+)	831	WP_003227543.1	spermidine synthase	-
FPL20_RS05290 (FPL20_GE00977)	speB	1006005..1006877 (+)	873	WP_003227545.1	agmatinase	-
FPL20_RS05295 (FPL20_GE00978)	ywhH	1006909..1007382 (-)	474	WP_003227547.1	YbaK/EbsC family protein	-
FPL20_RS05300 (FPL20_GE00979)	phrF	1007481..1007600 (-)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
FPL20_RS05305 (FPL20_GE00980)	rapF	1007584..1008729 (-)	1146	WP_003227549.1	response regulator aspartate phosphatase RapF	Regulator
FPL20_RS22665	-	1008732..1008962 (+)	231	WP_009968328.1	hypothetical protein	-
FPL20_RS05310 (FPL20_GE00981)	ywhK	1008959..1010314 (+)	1356	WP_003227552.1	YncE family protein	-
FPL20_RS05315 (FPL20_GE00982)	ywhL	1010353..1011729 (+)	1377	WP_003244415.1	YncE family protein	-
FPL20_RS05320 (FPL20_GE00983)	albG	1011735..1012436 (-)	702	WP_003243391.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
FPL20_RS05325 (FPL20_GE00984)	albF	1012433..1013713 (-)	1281	WP_003242974.1	pitrilysin family protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45609.09 Da
• Isoelectric Point: 5.1503

>NTDB_id=394468 FPL20_RS05305 WP_003227549.1 1007584..1008729(-) (rapF) [Bacillus subtilis strain JD-014]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=394468 FPL20_RS05305 WP_003227549.1 1007584..1008729(-) (rapF) [Bacillus subtilis strain JD-014]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAACTTCTTCAG
AGGCATGTACGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATAGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	100	100	1
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572