Detailed information
Bioinformatically predicted
Overview
| Name | comFC/cflB | Type | Machinery gene |
| Locus tag | GE023_RS11010 | Genome accession | NZ_CP053789 |
| Coordinates | 1629271..1629693 (-) | Length | 140 a.a. |
| NCBI ID | WP_003044691.1 | Uniprot ID | - |
| Organism | Streptococcus canis strain HL_98_2 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1624271..1634693
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GE023_RS08100 (GE023_008095) | - | 1627637..1628591 (+) | 955 | Protein_1553 | IS30 family transposase | - |
| GE023_RS08105 (GE023_008100) | raiA | 1628643..1629191 (-) | 549 | WP_003044623.1 | ribosome-associated translation inhibitor RaiA | - |
| GE023_RS11010 | comFC/cflB | 1629271..1629693 (-) | 423 | WP_003044691.1 | ComF family protein | Machinery gene |
| GE023_RS08115 (GE023_008110) | comFA/cflA | 1629908..1631233 (-) | 1326 | WP_093999505.1 | DEAD/DEAH box helicase | Machinery gene |
| GE023_RS08120 (GE023_008115) | - | 1631289..1631921 (+) | 633 | WP_159305988.1 | YigZ family protein | - |
| GE023_RS08125 (GE023_008120) | cysK | 1632039..1632974 (+) | 936 | WP_003044700.1 | cysteine synthase A | - |
| GE023_RS08130 (GE023_008125) | - | 1633141..1633500 (-) | 360 | WP_003044703.1 | S1 RNA-binding domain-containing protein | - |
Sequence
Protein
Download Length: 140 a.a. Molecular weight: 16378.81 Da Isoelectric Point: 9.8594
>NTDB_id=394468 GE023_RS11010 WP_003044691.1 1629271..1629693(-) (comFC/cflB) [Streptococcus canis strain HL_98_2]
MKAYFRQYKFQGDYLLRNVFAQELAEIIYQNYQGYVPVPVPISDKRYQERNFNQVSAILEAGKVRYHQIFEKHDDSRQSS
KTKKERLLTKNSYHLLEGVEIPPKILIVDDIYTTGSTIMALKKQLLQFGNSDIKSLSIAR
MKAYFRQYKFQGDYLLRNVFAQELAEIIYQNYQGYVPVPVPISDKRYQERNFNQVSAILEAGKVRYHQIFEKHDDSRQSS
KTKKERLLTKNSYHLLEGVEIPPKILIVDDIYTTGSTIMALKKQLLQFGNSDIKSLSIAR
Nucleotide
Download Length: 423 bp
>NTDB_id=394468 GE023_RS11010 WP_003044691.1 1629271..1629693(-) (comFC/cflB) [Streptococcus canis strain HL_98_2]
ATGAAAGCCTATTTCAGACAATATAAATTCCAAGGAGACTATTTATTAAGGAATGTCTTTGCTCAGGAATTAGCAGAAAT
CATTTATCAGAACTATCAAGGATATGTCCCTGTCCCAGTACCTATAAGCGACAAACGTTACCAAGAACGGAATTTTAATC
AGGTGAGCGCTATACTTGAGGCTGGTAAAGTTCGTTACCATCAAATTTTTGAAAAACATGATGATAGCCGTCAATCTTCA
AAGACGAAAAAGGAGCGCTTGTTGACTAAAAATTCTTATCATTTACTTGAAGGAGTCGAAATTCCCCCTAAAATCCTCAT
TGTTGATGATATTTATACCACTGGTAGTACCATTATGGCTTTGAAAAAGCAGTTACTACAATTTGGAAATAGTGACATCA
AAAGTTTGTCGATTGCACGTTAA
ATGAAAGCCTATTTCAGACAATATAAATTCCAAGGAGACTATTTATTAAGGAATGTCTTTGCTCAGGAATTAGCAGAAAT
CATTTATCAGAACTATCAAGGATATGTCCCTGTCCCAGTACCTATAAGCGACAAACGTTACCAAGAACGGAATTTTAATC
AGGTGAGCGCTATACTTGAGGCTGGTAAAGTTCGTTACCATCAAATTTTTGAAAAACATGATGATAGCCGTCAATCTTCA
AAGACGAAAAAGGAGCGCTTGTTGACTAAAAATTCTTATCATTTACTTGAAGGAGTCGAAATTCCCCCTAAAATCCTCAT
TGTTGATGATATTTATACCACTGGTAGTACCATTATGGCTTTGAAAAAGCAGTTACTACAATTTGGAAATAGTGACATCA
AAAGTTTGTCGATTGCACGTTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC/cflB | Streptococcus mitis SK321 |
45.714 |
100 |
0.457 |
| comFC/cflB | Streptococcus mitis NCTC 12261 |
45.714 |
100 |
0.457 |
| comFC/cflB | Streptococcus pneumoniae Rx1 |
45.714 |
100 |
0.457 |
| comFC/cflB | Streptococcus pneumoniae D39 |
45.714 |
100 |
0.457 |
| comFC/cflB | Streptococcus pneumoniae R6 |
45.714 |
100 |
0.457 |
| comFC/cflB | Streptococcus pneumoniae TIGR4 |
45.714 |
100 |
0.457 |
| comFC | Lactococcus lactis subsp. cremoris KW2 |
43.972 |
100 |
0.443 |