Detailed information NTG0393490

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: FIV04_RS12015
• Genome accession: NZ_CP045338
• Coordinates: 2697392..2700781 (+)
• Length: 1129 a.a.
• NCBI ID: WP_152469256.1
• Uniprot ID: A0A5P9BB36
• Organism: Vibrio sp. THAF190c
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2692392..2705781

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FIV04_RS11995 (FIV04_12045)	erpA	2692735..2693076 (-)	342	WP_032551754.1	iron-sulfur cluster insertion protein ErpA	-
FIV04_RS12000 (FIV04_12050)	hemL	2693374..2694663 (+)	1290	WP_152469254.1	glutamate-1-semialdehyde 2,1-aminomutase	-
FIV04_RS12005 (FIV04_12060)	-	2694974..2696059 (+)	1086	WP_150869232.1	AI-2E family transporter	-
FIV04_RS12010 (FIV04_12065)	rsmC	2696151..2697173 (+)	1023	WP_152469255.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
FIV04_RS12015 (FIV04_12070)	chiS	2697392..2700781 (+)	3390	WP_152469256.1	response regulator	Regulator
FIV04_RS12020 (FIV04_12075)	-	2701625..2703307 (+)	1683	WP_152469257.1	ABC transporter substrate-binding protein	-
FIV04_RS12025 (FIV04_12080)	-	2703478..2704464 (+)	987	WP_032551522.1	ABC transporter permease	-
FIV04_RS12030 (FIV04_12085)	-	2704467..2705492 (+)	1026	WP_150869236.1	ABC transporter permease	-

Sequence

Protein

• Length: 1129 a.a.
• Molecular weight: 126968.53 Da
• Isoelectric Point: 5.2681

>NTDB_id=393490 FIV04_RS12015 WP_152469256.1 2697392..2700781(+) (chiS) [Vibrio sp. THAF190c]
MFRFYRKQKFKRLQSTLMLAFLVLSLTPVTLIAVFFLQSHSQDLQEQSTSHLVSVRDTKQQQIIDYLQAQESQVIGFVRS
ELAIASGGRFYGLINAFQRLGLDIEEARSNAQQRYIQGSGNEVKTSILPESSSYVGSERYRLLHKRYHNAYLELIKRADF
DDVLLVDINGNVAYSVFKQDNYGTNLLTGKYKDSNLGLTFQKLAKDVTEKRKTNEDYTPVIVSDFLDENGKQSAWLGAPI
VQQGYLHSYAMFRLPINGITKLIADLNKSSNMQTLLVGSDHLPRSLAHSQQAIDLSLEVIDKALAGETAVGTFNNSSDQA
IIAAYAPIELDYANWALVVELPEKEAFARIHQLEKIFVIVMLTAIVLVFVASHYLSNFITSPLLKLTWAAEKVSAGDLDE
AMINTERKDEIGRLAVSFERMQRSIREKMGLIKSQNEELEDNLKTIQKQNEELQLANKLKDEFLATTSHELRTPLHGMVG
IAEALISGANGPIPANQKYQLDIIINSGQRLATLVDDLLDYHKMRYGSLDIKKSAVDLSAATSLVLELSHHLLGSKPIRI
INQVPADLGLVSSDPQRLEQVMYNLVGNAIKYTSEGKIVISASVIDDNIRVQVVDTGQGIPAEHLEHIFEPLIQAGQDAS
SYRQGAGLGLSISRQLIELMGGSLYVSSQPMVGTTFSFTLPLATPEELEHYNESSNYSHFQAPEVLESGQQDNSEIHEDP
DGPLLVIADDEPVNLRVLDSFLKLEGYRVRTACDGPETIELIEKEKPELLLLDIMMPGMSGYQVCETLRKEYDHAQLPII
MLTALNQPEDRVRGFEVGANDYLSKPFNKQELAARITAHLSASKAEQRRIENDQLQQELKHRAMVEANLLETQGRLLEQL
ESAPEAIICIRDDQRIRFANEAAAKLFRRSQEQLKRSMADEIIAPKYLRVDQAHYCGEIDVYISDTRQRVSSDILKLPEG
SGLDTMYIFNVGGAVNSNRINNLETAVEALSSYAFEGDKDKLQQLKELGGEFTRLADKAAGEGKNKQELMREVLVEAMTN
ALVYWESVTGETKFAFAEKSGLWRVYLDRSTLQTRTLDKYLRVETLPKTPRWRTVLSSLEFILEHCKEQTPERTHIEMLR
DKLQKLLTS

Nucleotide

• Length: 3390 bp

>NTDB_id=393490 FIV04_RS12015 WP_152469256.1 2697392..2700781(+) (chiS) [Vibrio sp. THAF190c]
ATGTTTAGATTCTATCGAAAGCAGAAGTTTAAACGCCTTCAAAGTACGCTCATGCTAGCGTTTCTCGTGTTAAGTCTGAC
TCCTGTTACTCTTATTGCTGTCTTTTTCCTTCAATCTCATAGCCAAGATCTACAAGAGCAGAGCACCTCTCACTTGGTGT
CTGTGCGTGATACCAAACAGCAACAGATCATTGATTACCTGCAAGCTCAAGAGTCGCAAGTGATTGGCTTTGTTCGTTCA
GAGTTGGCTATCGCCAGTGGCGGACGTTTTTATGGCCTTATCAATGCCTTTCAACGCCTCGGCCTAGACATCGAAGAAGC
ACGTAGCAATGCGCAACAACGTTATATTCAAGGTTCTGGCAACGAGGTAAAAACGTCAATTTTGCCTGAATCGAGCAGCT
ACGTTGGCAGTGAGCGTTATCGCCTACTTCACAAGCGCTACCACAACGCCTATCTAGAACTGATTAAACGTGCCGATTTT
GACGATGTCCTCCTGGTTGATATCAACGGTAACGTCGCTTACTCAGTGTTTAAACAAGACAACTACGGTACTAACCTGCT
CACTGGTAAATACAAAGACTCAAACCTTGGCCTGACGTTCCAGAAGCTAGCAAAAGACGTAACAGAAAAGCGCAAAACCA
ATGAAGACTACACCCCAGTAATCGTCTCTGACTTCCTTGATGAAAACGGCAAACAGAGCGCATGGCTAGGCGCACCGATT
GTTCAACAGGGCTATCTACATAGCTACGCGATGTTCAGACTACCAATCAATGGCATCACCAAGCTGATTGCGGATCTCAA
TAAGAGCTCGAACATGCAGACCCTACTCGTTGGTAGCGATCACCTTCCAAGAAGCTTGGCGCATAGTCAGCAAGCCATCG
ACCTCAGTCTCGAAGTCATTGATAAAGCATTAGCTGGTGAAACTGCGGTTGGCACCTTTAACAACAGTTCAGATCAAGCG
ATCATTGCCGCATACGCACCTATCGAGTTGGATTACGCAAACTGGGCGCTGGTGGTTGAACTACCAGAAAAAGAAGCCTT
TGCTCGAATCCACCAACTGGAAAAAATCTTTGTGATCGTAATGCTGACGGCAATAGTGCTGGTATTTGTCGCGTCTCATT
ACCTATCCAACTTCATTACTTCCCCCCTGCTTAAGCTCACTTGGGCTGCTGAGAAGGTATCGGCAGGCGATCTCGATGAA
GCGATGATCAATACCGAGCGAAAAGATGAAATAGGACGCCTGGCAGTCAGCTTTGAGCGTATGCAGCGCTCCATTCGTGA
AAAGATGGGGCTTATCAAGTCGCAAAATGAAGAGCTTGAAGATAACCTCAAGACCATCCAAAAACAGAATGAAGAGTTGC
AGCTCGCCAACAAGCTCAAAGATGAATTCCTAGCCACAACCTCGCATGAGCTACGTACTCCTTTACACGGCATGGTAGGT
ATCGCTGAGGCATTGATCTCTGGCGCGAATGGTCCTATTCCAGCAAATCAAAAATACCAACTGGATATCATCATCAACAG
TGGCCAGCGCCTCGCAACTCTGGTTGATGACCTGTTGGATTATCACAAAATGCGTTATGGCAGCTTAGACATTAAAAAGT
CAGCGGTTGACCTCTCTGCCGCCACTAGCCTGGTGTTAGAACTTTCTCATCACCTACTTGGCAGTAAGCCGATTCGTATC
ATCAACCAAGTTCCAGCGGACTTAGGTCTTGTGTCATCCGACCCACAACGCCTAGAGCAGGTAATGTATAACTTGGTTGG
CAATGCCATTAAGTACACCTCTGAGGGCAAGATCGTTATCTCTGCGAGCGTGATTGACGACAATATTCGAGTTCAGGTGG
TCGATACTGGCCAAGGCATCCCAGCAGAGCATTTAGAGCATATCTTTGAACCACTTATTCAAGCAGGACAAGACGCAAGT
TCATATCGACAAGGTGCCGGGCTTGGATTATCGATCAGCCGTCAATTGATTGAATTAATGGGTGGTTCACTCTACGTCAG
CAGTCAACCAATGGTGGGGACGACATTCAGTTTCACGCTACCACTAGCAACACCGGAAGAGCTTGAGCATTACAATGAGT
CTAGCAATTACTCGCACTTCCAAGCGCCAGAGGTACTAGAGAGCGGCCAGCAAGATAATAGTGAGATTCACGAAGACCCA
GATGGCCCGCTACTTGTGATTGCCGATGACGAACCGGTTAACCTACGTGTGCTTGATAGCTTCTTGAAGCTCGAGGGTTA
TCGCGTCCGCACGGCTTGCGATGGTCCTGAGACCATTGAATTAATTGAAAAAGAGAAACCAGAGCTGCTACTGCTCGACA
TCATGATGCCAGGTATGAGCGGCTACCAGGTGTGTGAAACACTGAGAAAAGAGTATGACCACGCACAACTACCAATCATT
ATGCTTACCGCGCTAAACCAACCTGAAGACCGCGTTCGAGGCTTTGAGGTTGGAGCCAATGATTACCTGTCTAAGCCGTT
CAATAAGCAAGAACTAGCGGCGCGAATCACAGCGCACCTATCAGCAAGTAAGGCAGAGCAACGACGCATCGAGAACGACC
AGCTGCAGCAAGAGTTGAAGCATAGAGCAATGGTAGAAGCCAACCTGCTTGAAACCCAAGGTCGTCTGCTTGAGCAATTA
GAATCAGCGCCTGAAGCGATTATCTGCATTCGCGATGATCAACGCATACGCTTTGCTAATGAAGCTGCCGCTAAGCTATT
TAGACGCAGCCAAGAACAACTCAAGCGTTCTATGGCTGATGAAATCATTGCACCGAAGTATTTACGCGTAGACCAAGCAC
ACTACTGTGGCGAGATTGATGTCTACATCAGTGATACTCGCCAACGAGTTTCAAGTGATATTCTCAAACTACCTGAAGGC
TCTGGATTAGACACTATGTATATTTTCAACGTTGGCGGTGCAGTAAACTCAAATCGTATCAACAACTTAGAAACGGCCGT
AGAAGCGCTGTCGAGTTATGCCTTTGAAGGTGATAAAGACAAGCTACAACAACTGAAAGAGCTAGGCGGCGAATTCACTC
GCCTTGCTGACAAGGCCGCTGGTGAAGGTAAGAATAAACAAGAGTTAATGCGAGAGGTGCTTGTCGAAGCCATGACCAAC
GCCCTTGTTTATTGGGAGTCGGTCACAGGAGAGACTAAGTTTGCCTTCGCTGAAAAGAGTGGCTTATGGCGTGTCTATCT
CGACAGAAGTACCTTGCAAACTCGAACACTAGATAAGTACTTACGTGTAGAAACTCTGCCTAAGACGCCTCGTTGGCGCA
CCGTATTGAGCTCTCTTGAATTTATTCTGGAGCACTGTAAAGAGCAAACACCGGAAAGAACTCACATTGAAATGCTCAGA
GATAAACTACAAAAGCTCCTCACTAGTTAG

Domains

Predicted by InterproScan.

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• HAMP domain (HAMP) (375-427)

• PAS domain (PAS_8) (880-917)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• Response regulator receiver domain (Response_reg) (726-836)

3D structure

• AlphaFold DB: A0A5P9BB36

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	76.971	100	0.77