Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxO   Type   Regulator
Locus tag   FIV04_RS10075 Genome accession   NZ_CP045338
Coordinates   2272150..2273550 (-) Length   466 a.a.
NCBI ID   WP_032551999.1    Uniprot ID   A0A5P9B855
Organism   Vibrio sp. THAF190c     
Function   promote HapR production (predicted from homology)   
Competence regulation

Genomic Context

Location: 2267150..2278550
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FIV04_RS10040 (FIV04_10090) moaE 2267736..2268191 (-) 456 WP_032552006.1 molybdopterin synthase catalytic subunit MoaE -
  FIV04_RS10045 (FIV04_10095) moaD 2268194..2268439 (-) 246 WP_152469048.1 molybdopterin synthase sulfur carrier subunit -
  FIV04_RS10050 (FIV04_10100) moaC 2268439..2268915 (-) 477 WP_032552004.1 cyclic pyranopterin monophosphate synthase MoaC -
  FIV04_RS10055 (FIV04_10105) moaB 2268927..2269439 (-) 513 WP_150868996.1 molybdenum cofactor biosynthesis protein B -
  FIV04_RS10060 (FIV04_10110) moaA 2269528..2270517 (-) 990 WP_032552002.1 GTP 3',8-cyclase MoaA -
  FIV04_RS10065 (FIV04_10115) - 2270855..2271742 (+) 888 WP_152469049.1 YvcK family protein -
  FIV04_RS10070 (FIV04_10120) luxU 2271795..2272130 (-) 336 WP_032552000.1 quorum-sensing phosphorelay protein LuxU -
  FIV04_RS10075 (FIV04_10125) luxO 2272150..2273550 (-) 1401 WP_032551999.1 quorum-sensing sigma-54 dependent transcriptional regulator LuxO Regulator
  FIV04_RS10080 (FIV04_10135) uvrB 2273820..2275850 (-) 2031 WP_152469050.1 excinuclease ABC subunit UvrB -
  FIV04_RS10090 (FIV04_10145) rsxA 2276969..2277547 (+) 579 WP_152469051.1 electron transport complex subunit RsxA -
  FIV04_RS10095 (FIV04_10150) rsxB 2277550..2278134 (+) 585 WP_152469052.1 electron transport complex subunit RsxB -

Sequence

Protein


Download         Length: 466 a.a.        Molecular weight: 52043.49 Da        Isoelectric Point: 5.9775

>NTDB_id=393489 FIV04_RS10075 WP_032551999.1 2272150..2273550(-) (luxO) [Vibrio sp. THAF190c]
MQSKTFDNKSKYLLMVEDTASVAALYRSYLTPLEIDINIVGTGKEAIESLNHRIPDLILLDLRLPDMTGMDVLFAVKQNF
PEVPVIFMTAHGSIDTAVEAMRHGSQDFLIKPCEADRLRITVNNAIRKATKLKNSAEHPGSQNYQGFIGSSQTMQQVYRT
IDSAASSKASIFITGESGTGKEVCAEAVHAASKRGDKPFIAINCAAIPKDLIESELFGHVKGAFTGAATDRQGAAELADG
GTLFLDELCEMDLELQTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRFREDLYYRLYVIPLHLPPLRE
RGEDVIEIAYSLLGYMSVEEGKAFVRFSQEVIDRFNQYEWPGNVRQLQNVLRNVVVLNNGKEINLNMLPPPLNQPLENSL
RLKEKQSEDISVKDIFPLWLTEKTAIEQAIKACDGNIPRAAGFLDVSPSTIYRKLQAWNAKQSSSE

Nucleotide


Download         Length: 1401 bp        

>NTDB_id=393489 FIV04_RS10075 WP_032551999.1 2272150..2273550(-) (luxO) [Vibrio sp. THAF190c]
ATGCAATCAAAAACATTTGATAACAAGTCAAAGTACTTGTTAATGGTGGAAGATACAGCATCAGTTGCGGCGTTGTATCG
TTCTTACCTGACCCCGTTAGAGATAGATATCAATATCGTGGGTACAGGTAAAGAGGCTATTGAGAGCCTTAACCATAGAA
TCCCAGACCTCATTCTCTTGGATCTTCGTCTTCCTGATATGACGGGGATGGATGTCTTATTTGCTGTAAAACAGAATTTC
CCAGAAGTCCCGGTGATCTTCATGACCGCACATGGCTCAATCGATACTGCAGTTGAAGCAATGCGTCACGGATCTCAAGA
TTTCTTGATTAAGCCATGTGAAGCAGACCGTCTTCGTATCACAGTAAACAACGCAATCCGTAAAGCAACTAAGCTGAAGA
ATAGCGCTGAGCACCCGGGTAGCCAAAATTATCAAGGTTTTATCGGCAGTAGCCAAACCATGCAGCAGGTGTATCGTACC
ATCGATTCAGCTGCTTCAAGTAAAGCCAGTATTTTTATCACTGGTGAAAGTGGTACCGGTAAAGAGGTGTGTGCCGAAGC
GGTCCATGCTGCGAGTAAACGTGGTGACAAGCCGTTTATTGCCATTAACTGTGCCGCTATCCCTAAAGACTTGATTGAGA
GTGAGCTGTTTGGTCACGTTAAAGGTGCGTTCACAGGCGCGGCTACCGATCGACAAGGTGCTGCTGAGTTAGCGGATGGA
GGAACTTTGTTCCTAGATGAGCTTTGTGAAATGGATCTGGAGCTTCAAACAAAACTTCTTCGCTTTATCCAAACGGGTAC
GTTCCAAAAAGTAGGTTCTTCAAAAATGAAGAGTGTGGATGTGCGCTTTGTTTGTGCGACGAACCGTGACCCATGGAAAG
AAGTGCAAGAGGGGCGCTTCCGCGAAGATTTATATTACCGCCTGTACGTTATCCCGTTGCACCTTCCGCCATTGCGCGAG
CGTGGTGAAGACGTCATTGAAATTGCATACTCATTACTAGGCTATATGTCAGTGGAAGAGGGCAAAGCGTTTGTTCGTTT
CTCTCAAGAAGTGATCGACCGATTTAATCAATATGAGTGGCCAGGTAATGTACGTCAACTGCAGAATGTTTTGCGAAATG
TTGTGGTGCTTAATAACGGCAAAGAGATCAACTTAAACATGTTGCCACCACCACTCAACCAACCGCTGGAAAACAGTCTA
CGATTGAAAGAGAAACAGAGCGAAGATATATCTGTTAAAGATATCTTCCCATTGTGGCTCACTGAAAAAACTGCGATAGA
ACAAGCAATTAAAGCGTGTGATGGTAATATTCCGAGAGCCGCTGGTTTCTTAGATGTTAGCCCATCAACTATTTATCGCA
AATTACAGGCGTGGAACGCAAAACAATCATCCTCAGAATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(14-122)

Sigma-54 interaction domain (Sigma54_activat)

(148-313)

Bacterial regulatory protein, Fis family (HTH_8)

(418-458)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5P9B855

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxO Vibrio cholerae strain A1552

85.045

96.137

0.818

Multiple sequence alignment