Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | GCB94_RS05625 | Genome accession | NZ_CP045306 |
| Coordinates | 1012534..1013133 (+) | Length | 199 a.a. |
| NCBI ID | WP_003632472.1 | Uniprot ID | - |
| Organism | Legionella longbeachae strain B1445CHC | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1007534..1018133
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GCB94_RS05610 (GCB94_05590) | - | 1009242..1010672 (-) | 1431 | WP_003632475.1 | hypothetical protein | - |
| GCB94_RS05615 (GCB94_05595) | pilM | 1010909..1011969 (+) | 1061 | Protein_886 | type IV pilus assembly protein PilM | - |
| GCB94_RS05620 (GCB94_05600) | pilN | 1011974..1012537 (+) | 564 | WP_003632473.1 | PilN domain-containing protein | Machinery gene |
| GCB94_RS05625 (GCB94_05605) | pilO | 1012534..1013133 (+) | 600 | WP_003632472.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| GCB94_RS05630 (GCB94_05610) | pilP | 1013130..1013636 (+) | 507 | WP_003632471.1 | pilus assembly protein PilP | Machinery gene |
| GCB94_RS05635 (GCB94_05615) | pilQ | 1013645..1015750 (+) | 2106 | WP_003632470.1 | type IV pilus secretin PilQ | Machinery gene |
| GCB94_RS05640 (GCB94_05620) | aroK | 1016092..1016613 (+) | 522 | WP_027270601.1 | shikimate kinase AroK | - |
| GCB94_RS05645 (GCB94_05625) | aroB | 1016600..1017703 (+) | 1104 | WP_003632468.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 199 a.a. Molecular weight: 22829.56 Da Isoelectric Point: 6.2556
>NTDB_id=393304 GCB94_RS05625 WP_003632472.1 1012534..1013133(+) (pilO) [Legionella longbeachae strain B1445CHC]
MNTINLSELTLENVGQWPLIIKIGMLLGTSLLIIALGYWLIIKDNFTQFDTLKQQETTLKADFENKQRQLYNLPAYRAQL
KTLTGRFASVLTQLPEKNEMPGLLEEISKTGVASGLRFELFAPQPEVVHDFYIELPIKISVVGTYFQLAMFISRVAEMRR
IVTLHDFSIEGETSKDHKVISEDELVMNITAKIYRYRAQ
MNTINLSELTLENVGQWPLIIKIGMLLGTSLLIIALGYWLIIKDNFTQFDTLKQQETTLKADFENKQRQLYNLPAYRAQL
KTLTGRFASVLTQLPEKNEMPGLLEEISKTGVASGLRFELFAPQPEVVHDFYIELPIKISVVGTYFQLAMFISRVAEMRR
IVTLHDFSIEGETSKDHKVISEDELVMNITAKIYRYRAQ
Nucleotide
Download Length: 600 bp
>NTDB_id=393304 GCB94_RS05625 WP_003632472.1 1012534..1013133(+) (pilO) [Legionella longbeachae strain B1445CHC]
ATGAACACTATTAATCTCAGTGAATTAACCTTGGAAAATGTAGGGCAATGGCCACTGATAATAAAAATTGGTATGCTTTT
AGGTACAAGCCTTTTAATTATTGCACTGGGATATTGGCTTATTATTAAAGATAATTTTACTCAGTTTGATACGCTAAAAC
AGCAAGAAACAACTTTAAAAGCTGATTTTGAAAACAAACAACGTCAGCTGTATAATTTACCTGCCTATCGTGCCCAACTA
AAGACTTTGACTGGCCGCTTTGCTTCGGTGCTTACGCAGCTTCCTGAAAAAAATGAAATGCCTGGTTTACTGGAAGAAAT
TTCCAAGACAGGAGTTGCATCAGGTTTAAGGTTTGAGCTATTTGCTCCCCAGCCTGAGGTAGTTCATGATTTTTATATAG
AACTGCCTATAAAAATTTCGGTGGTAGGGACTTATTTTCAATTAGCAATGTTTATTAGTCGAGTTGCTGAAATGAGAAGG
ATTGTTACCTTACATGACTTTAGTATAGAAGGAGAAACATCTAAAGATCATAAGGTTATTTCAGAGGATGAATTGGTGAT
GAATATTACCGCTAAAATATATCGATATCGCGCGCAATGA
ATGAACACTATTAATCTCAGTGAATTAACCTTGGAAAATGTAGGGCAATGGCCACTGATAATAAAAATTGGTATGCTTTT
AGGTACAAGCCTTTTAATTATTGCACTGGGATATTGGCTTATTATTAAAGATAATTTTACTCAGTTTGATACGCTAAAAC
AGCAAGAAACAACTTTAAAAGCTGATTTTGAAAACAAACAACGTCAGCTGTATAATTTACCTGCCTATCGTGCCCAACTA
AAGACTTTGACTGGCCGCTTTGCTTCGGTGCTTACGCAGCTTCCTGAAAAAAATGAAATGCCTGGTTTACTGGAAGAAAT
TTCCAAGACAGGAGTTGCATCAGGTTTAAGGTTTGAGCTATTTGCTCCCCAGCCTGAGGTAGTTCATGATTTTTATATAG
AACTGCCTATAAAAATTTCGGTGGTAGGGACTTATTTTCAATTAGCAATGTTTATTAGTCGAGTTGCTGAAATGAGAAGG
ATTGTTACCTTACATGACTTTAGTATAGAAGGAGAAACATCTAAAGATCATAAGGTTATTTCAGAGGATGAATTGGTGAT
GAATATTACCGCTAAAATATATCGATATCGCGCGCAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Legionella pneumophila strain ERS1305867 |
69.849 |
100 |
0.698 |
| comO | Acinetobacter baylyi ADP1 |
41.489 |
94.472 |
0.392 |
| pilO | Acinetobacter baumannii D1279779 |
37.895 |
95.477 |
0.362 |