Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | GCB94_RS05620 | Genome accession | NZ_CP045306 |
| Coordinates | 1011974..1012537 (+) | Length | 187 a.a. |
| NCBI ID | WP_003632473.1 | Uniprot ID | D3HQQ0 |
| Organism | Legionella longbeachae strain B1445CHC | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1006974..1017537
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GCB94_RS05610 (GCB94_05590) | - | 1009242..1010672 (-) | 1431 | WP_003632475.1 | hypothetical protein | - |
| GCB94_RS05615 (GCB94_05595) | pilM | 1010909..1011969 (+) | 1061 | Protein_886 | type IV pilus assembly protein PilM | - |
| GCB94_RS05620 (GCB94_05600) | pilN | 1011974..1012537 (+) | 564 | WP_003632473.1 | PilN domain-containing protein | Machinery gene |
| GCB94_RS05625 (GCB94_05605) | pilO | 1012534..1013133 (+) | 600 | WP_003632472.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| GCB94_RS05630 (GCB94_05610) | pilP | 1013130..1013636 (+) | 507 | WP_003632471.1 | pilus assembly protein PilP | Machinery gene |
| GCB94_RS05635 (GCB94_05615) | pilQ | 1013645..1015750 (+) | 2106 | WP_003632470.1 | type IV pilus secretin PilQ | Machinery gene |
| GCB94_RS05640 (GCB94_05620) | aroK | 1016092..1016613 (+) | 522 | WP_027270601.1 | shikimate kinase AroK | - |
Sequence
Protein
Download Length: 187 a.a. Molecular weight: 21920.72 Da Isoelectric Point: 7.3178
>NTDB_id=393303 GCB94_RS05620 WP_003632473.1 1011974..1012537(+) (pilN) [Legionella longbeachae strain B1445CHC]
MTQINLLPWREQKREQEKKLFMVLFFIVIALSIFIVFLINTYASDLVSNQLVRNQMLQDEIAAMNSQLIEIKNLKKTREL
FISRMFIVQHLQSTRTLMVHLFDELINVMPSGIYLTKVEGKNDILSVTGYTESNTYVSILMKNIEINEWIHSPVLSEIKK
EDRQEPANNEFKLNFVLAPQFQLGIIR
MTQINLLPWREQKREQEKKLFMVLFFIVIALSIFIVFLINTYASDLVSNQLVRNQMLQDEIAAMNSQLIEIKNLKKTREL
FISRMFIVQHLQSTRTLMVHLFDELINVMPSGIYLTKVEGKNDILSVTGYTESNTYVSILMKNIEINEWIHSPVLSEIKK
EDRQEPANNEFKLNFVLAPQFQLGIIR
Nucleotide
Download Length: 564 bp
>NTDB_id=393303 GCB94_RS05620 WP_003632473.1 1011974..1012537(+) (pilN) [Legionella longbeachae strain B1445CHC]
ATGACACAAATTAATCTTCTTCCTTGGCGAGAACAAAAGCGGGAGCAAGAAAAAAAGCTGTTCATGGTGTTATTTTTCAT
AGTTATAGCGCTTTCAATATTTATTGTGTTTTTAATTAATACTTATGCCTCTGATTTAGTAAGTAATCAACTTGTTCGAA
ATCAGATGCTGCAAGATGAAATAGCGGCTATGAATAGCCAGTTAATTGAAATTAAAAATTTGAAAAAAACTCGAGAATTA
TTCATTTCCAGAATGTTTATAGTTCAGCATTTGCAATCAACCAGAACCTTGATGGTTCATTTATTTGATGAATTAATTAA
TGTAATGCCTTCCGGTATTTATTTAACAAAGGTAGAAGGAAAAAATGATATTCTTTCAGTCACTGGTTATACTGAATCAA
ATACCTATGTTTCAATTTTAATGAAAAATATAGAAATTAATGAATGGATCCATTCTCCTGTTCTGAGCGAAATTAAGAAG
GAAGACCGTCAGGAACCTGCTAATAATGAATTTAAGTTAAATTTTGTTCTTGCCCCTCAATTTCAGTTGGGGATTATACG
ATGA
ATGACACAAATTAATCTTCTTCCTTGGCGAGAACAAAAGCGGGAGCAAGAAAAAAAGCTGTTCATGGTGTTATTTTTCAT
AGTTATAGCGCTTTCAATATTTATTGTGTTTTTAATTAATACTTATGCCTCTGATTTAGTAAGTAATCAACTTGTTCGAA
ATCAGATGCTGCAAGATGAAATAGCGGCTATGAATAGCCAGTTAATTGAAATTAAAAATTTGAAAAAAACTCGAGAATTA
TTCATTTCCAGAATGTTTATAGTTCAGCATTTGCAATCAACCAGAACCTTGATGGTTCATTTATTTGATGAATTAATTAA
TGTAATGCCTTCCGGTATTTATTTAACAAAGGTAGAAGGAAAAAATGATATTCTTTCAGTCACTGGTTATACTGAATCAA
ATACCTATGTTTCAATTTTAATGAAAAATATAGAAATTAATGAATGGATCCATTCTCCTGTTCTGAGCGAAATTAAGAAG
GAAGACCGTCAGGAACCTGCTAATAATGAATTTAAGTTAAATTTTGTTCTTGCCCCTCAATTTCAGTTGGGGATTATACG
ATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Legionella pneumophila strain ERS1305867 |
62.295 |
97.861 |
0.61 |