Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | GA660_RS01665 | Genome accession | NZ_CP045129 |
| Coordinates | 348376..349095 (+) | Length | 239 a.a. |
| NCBI ID | WP_005180513.1 | Uniprot ID | N9KYM2 |
| Organism | Acinetobacter indicus strain TQ04 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 343376..354095
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GA660_RS01650 | ponA | 343938..346514 (-) | 2577 | WP_160240900.1 | penicillin-binding protein PBP1a | - |
| GA660_RS01655 | pilM | 346686..347744 (+) | 1059 | WP_104505685.1 | pilus assembly protein PilM | Machinery gene |
| GA660_RS01660 | pilN | 347744..348379 (+) | 636 | WP_005180516.1 | PilN domain-containing protein | Machinery gene |
| GA660_RS01665 | pilO | 348376..349095 (+) | 720 | WP_005180513.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| GA660_RS01670 | pilP | 349095..349622 (+) | 528 | WP_104489345.1 | pilus assembly protein PilP | Machinery gene |
| GA660_RS01675 | pilQ | 349638..351701 (+) | 2064 | WP_160240901.1 | type IV pilus secretin PilQ | Machinery gene |
| GA660_RS01680 | aroK | 351738..352280 (+) | 543 | WP_075167858.1 | shikimate kinase AroK | - |
| GA660_RS01685 | aroB | 352303..353385 (+) | 1083 | WP_016658450.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 239 a.a. Molecular weight: 27087.71 Da Isoelectric Point: 5.1311
>NTDB_id=392117 GA660_RS01665 WP_005180513.1 348376..349095(+) (pilO) [Acinetobacter indicus strain TQ04]
MSLDQYEEMNQDPVAAPKKKMTLDKFLQQWNTLDPNNYGSWPFSVKLTIWIFIIILIAFLGYFLAIKPKLDAISNARAQE
QNLLNEFREKDSKLRNLQQYQAQLQEMEANFNQQLQQLPKETEIPGLVEDVNVTGVNSGLRFKNIRLENEIKQEFFIEQP
ISIEATGDYHAFGSFVSGTAALPRIVTMHDFTITAGENKEKKTDIPQITYVAKAKTYRYVGNTDAQAGNSTTPATGAAQ
MSLDQYEEMNQDPVAAPKKKMTLDKFLQQWNTLDPNNYGSWPFSVKLTIWIFIIILIAFLGYFLAIKPKLDAISNARAQE
QNLLNEFREKDSKLRNLQQYQAQLQEMEANFNQQLQQLPKETEIPGLVEDVNVTGVNSGLRFKNIRLENEIKQEFFIEQP
ISIEATGDYHAFGSFVSGTAALPRIVTMHDFTITAGENKEKKTDIPQITYVAKAKTYRYVGNTDAQAGNSTTPATGAAQ
Nucleotide
Download Length: 720 bp
>NTDB_id=392117 GA660_RS01665 WP_005180513.1 348376..349095(+) (pilO) [Acinetobacter indicus strain TQ04]
ATGAGTCTCGATCAATATGAAGAAATGAATCAGGATCCTGTTGCTGCGCCAAAGAAAAAAATGACGCTGGATAAATTCCT
GCAGCAATGGAATACCTTAGATCCGAATAACTATGGCAGCTGGCCGTTTTCCGTCAAGCTGACCATCTGGATCTTTATTA
TTATTTTAATTGCCTTCCTGGGCTATTTCCTGGCCATCAAGCCGAAGCTGGATGCAATTTCCAATGCGCGTGCACAAGAG
CAGAACCTGCTGAATGAGTTTCGTGAAAAAGATTCCAAACTGCGTAACTTGCAGCAATATCAGGCACAGTTACAGGAAAT
GGAAGCCAACTTTAACCAGCAGCTACAACAGTTGCCAAAAGAAACCGAAATTCCAGGTCTGGTTGAAGATGTCAACGTTA
CGGGCGTGAATTCAGGCTTAAGATTTAAAAATATCCGTCTGGAAAATGAAATCAAGCAAGAGTTCTTTATCGAGCAGCCA
ATTTCGATTGAAGCCACCGGTGATTATCATGCTTTTGGTTCTTTTGTGAGCGGTACAGCCGCTTTACCGCGAATTGTGAC
CATGCATGATTTCACTATTACTGCCGGTGAAAACAAGGAAAAGAAAACCGATATTCCACAAATTACCTATGTCGCGAAAG
CCAAGACCTATCGCTATGTCGGGAATACCGATGCACAGGCCGGGAATAGCACGACTCCAGCCACAGGAGCAGCACAATGA
ATGAGTCTCGATCAATATGAAGAAATGAATCAGGATCCTGTTGCTGCGCCAAAGAAAAAAATGACGCTGGATAAATTCCT
GCAGCAATGGAATACCTTAGATCCGAATAACTATGGCAGCTGGCCGTTTTCCGTCAAGCTGACCATCTGGATCTTTATTA
TTATTTTAATTGCCTTCCTGGGCTATTTCCTGGCCATCAAGCCGAAGCTGGATGCAATTTCCAATGCGCGTGCACAAGAG
CAGAACCTGCTGAATGAGTTTCGTGAAAAAGATTCCAAACTGCGTAACTTGCAGCAATATCAGGCACAGTTACAGGAAAT
GGAAGCCAACTTTAACCAGCAGCTACAACAGTTGCCAAAAGAAACCGAAATTCCAGGTCTGGTTGAAGATGTCAACGTTA
CGGGCGTGAATTCAGGCTTAAGATTTAAAAATATCCGTCTGGAAAATGAAATCAAGCAAGAGTTCTTTATCGAGCAGCCA
ATTTCGATTGAAGCCACCGGTGATTATCATGCTTTTGGTTCTTTTGTGAGCGGTACAGCCGCTTTACCGCGAATTGTGAC
CATGCATGATTTCACTATTACTGCCGGTGAAAACAAGGAAAAGAAAACCGATATTCCACAAATTACCTATGTCGCGAAAG
CCAAGACCTATCGCTATGTCGGGAATACCGATGCACAGGCCGGGAATAGCACGACTCCAGCCACAGGAGCAGCACAATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Acinetobacter baumannii D1279779 |
69.748 |
99.582 |
0.695 |
| comO | Acinetobacter baylyi ADP1 |
67.213 |
100 |
0.686 |