Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | GA660_RS01670 | Genome accession | NZ_CP045129 |
| Coordinates | 349095..349622 (+) | Length | 175 a.a. |
| NCBI ID | WP_104489345.1 | Uniprot ID | - |
| Organism | Acinetobacter indicus strain TQ04 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 344095..354622
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GA660_RS01655 | pilM | 346686..347744 (+) | 1059 | WP_104505685.1 | pilus assembly protein PilM | Machinery gene |
| GA660_RS01660 | pilN | 347744..348379 (+) | 636 | WP_005180516.1 | PilN domain-containing protein | Machinery gene |
| GA660_RS01665 | pilO | 348376..349095 (+) | 720 | WP_005180513.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| GA660_RS01670 | pilP | 349095..349622 (+) | 528 | WP_104489345.1 | pilus assembly protein PilP | Machinery gene |
| GA660_RS01675 | pilQ | 349638..351701 (+) | 2064 | WP_160240901.1 | type IV pilus secretin PilQ | Machinery gene |
| GA660_RS01680 | aroK | 351738..352280 (+) | 543 | WP_075167858.1 | shikimate kinase AroK | - |
| GA660_RS01685 | aroB | 352303..353385 (+) | 1083 | WP_016658450.1 | 3-dehydroquinate synthase | - |
| GA660_RS01690 | - | 353398..354234 (+) | 837 | WP_160240902.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 19272.46 Da Isoelectric Point: 7.1666
>NTDB_id=392118 GA660_RS01670 WP_104489345.1 349095..349622(+) (pilP) [Acinetobacter indicus strain TQ04]
MKFEKLSLVLVLGLLAAGCDSRIDAVNTQMAEIRNQPPLPIEPAPTFEPAPVFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNLSRQLQPLESYALETLSMKGSMRGQRGEILALIQTPDGEIERIQRGSYMGLNHGRVINITPTQIDLIEIIPDGREG
YVERPRSLVLIGPAP
MKFEKLSLVLVLGLLAAGCDSRIDAVNTQMAEIRNQPPLPIEPAPTFEPAPVFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNLSRQLQPLESYALETLSMKGSMRGQRGEILALIQTPDGEIERIQRGSYMGLNHGRVINITPTQIDLIEIIPDGREG
YVERPRSLVLIGPAP
Nucleotide
Download Length: 528 bp
>NTDB_id=392118 GA660_RS01670 WP_104489345.1 349095..349622(+) (pilP) [Acinetobacter indicus strain TQ04]
ATGAAATTTGAAAAACTTTCGTTGGTTCTGGTGTTGGGCCTACTGGCTGCAGGCTGTGATTCACGTATTGATGCCGTGAA
TACACAAATGGCAGAAATCCGTAATCAGCCGCCGTTACCGATTGAACCGGCACCGACTTTTGAGCCGGCACCTGTATTTA
ACTATGCAGCACATCAGCTGAAAAGCCCGTTTATGCCAAGTTCTCTGGCGGCCGAGCTGAAAATTATGGCGGGTAAACGG
GTTTATCCAAACCTGTCGCGCCAGTTGCAGCCTTTAGAAAGCTATGCACTGGAAACCTTAAGCATGAAAGGTAGCATGCG
CGGGCAACGCGGCGAGATTCTGGCCCTGATTCAAACTCCAGATGGGGAAATTGAACGGATTCAGCGCGGCAGCTATATGG
GCTTGAATCATGGTCGGGTCATCAATATCACACCGACACAAATTGACTTAATTGAGATTATTCCAGATGGTCGCGAAGGG
TATGTTGAACGTCCAAGAAGTCTAGTACTGATTGGGCCGGCGCCATAA
ATGAAATTTGAAAAACTTTCGTTGGTTCTGGTGTTGGGCCTACTGGCTGCAGGCTGTGATTCACGTATTGATGCCGTGAA
TACACAAATGGCAGAAATCCGTAATCAGCCGCCGTTACCGATTGAACCGGCACCGACTTTTGAGCCGGCACCTGTATTTA
ACTATGCAGCACATCAGCTGAAAAGCCCGTTTATGCCAAGTTCTCTGGCGGCCGAGCTGAAAATTATGGCGGGTAAACGG
GTTTATCCAAACCTGTCGCGCCAGTTGCAGCCTTTAGAAAGCTATGCACTGGAAACCTTAAGCATGAAAGGTAGCATGCG
CGGGCAACGCGGCGAGATTCTGGCCCTGATTCAAACTCCAGATGGGGAAATTGAACGGATTCAGCGCGGCAGCTATATGG
GCTTGAATCATGGTCGGGTCATCAATATCACACCGACACAAATTGACTTAATTGAGATTATTCCAGATGGTCGCGAAGGG
TATGTTGAACGTCCAAGAAGTCTAGTACTGATTGGGCCGGCGCCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Acinetobacter baumannii D1279779 |
75.429 |
100 |
0.754 |
| comL | Acinetobacter baylyi ADP1 |
71.856 |
95.429 |
0.686 |