Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   FSA28_RS10365 Genome accession   NZ_CP044495
Coordinates   2047587..2048795 (+) Length   402 a.a.
NCBI ID   WP_002262650.1    Uniprot ID   Q8DRQ6
Organism   Streptococcus mutans strain UA140     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2042587..2053795
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FSA28_RS10355 (FSA28_1823) - 2045896..2046558 (-) 663 WP_002262652.1 YoaK family protein -
  FSA28_RS10360 (FSA28_1824) rlmH 2046902..2047381 (-) 480 WP_002269936.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  FSA28_RS10365 (FSA28_1825) htrA 2047587..2048795 (+) 1209 WP_002262650.1 trypsin-like peptidase domain-containing protein Regulator
  FSA28_RS10370 (FSA28_1826) spo0J 2049270..2050043 (+) 774 WP_018110249.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 402 a.a.        Molecular weight: 43071.55 Da        Isoelectric Point: 8.8092

>NTDB_id=390472 FSA28_RS10365 WP_002262650.1 2047587..2048795(+) (htrA) [Streptococcus mutans strain UA140]
MNNTKSHPFLKWFIPFLVIFLTFILGVISTLTFNWITGNKSFSNNGKTTVSNVIYDTKSNTTKAVKNVKNTVVSVINYQK
TDNSYYNYDSGSQEKNKSEDGLGVYGEGSGVIYKKDGDSAYLVTNNHVVKDAEKLEIMMANGKKVVGKLVGSDTYSDLAV
IKISSKYVTTVAEFANSDKIKVGEPAIAIGSPLGSDYANSVTEGIVSSLSRTVTSQNENGETISTNAIQTDAAINPGNSG
GALINIKGQVIGINSSKIASSNNSNSGVAVEGMGFAIPSNDVVSIINQLEENGEVVRPALGISMANLSEASTSGRDTLKI
PSDVTSGIVVLSTQSGMPADGKLKKYDVITEIDGKKVASISDLQSILYKHKKGDKIKLTFYREKDKQTVEIQLTKTSQDL
NH

Nucleotide


Download         Length: 1209 bp        

>NTDB_id=390472 FSA28_RS10365 WP_002262650.1 2047587..2048795(+) (htrA) [Streptococcus mutans strain UA140]
GTGAATAATACGAAATCTCACCCTTTTTTAAAATGGTTTATACCTTTTTTAGTTATTTTTTTAACTTTTATTTTAGGGGT
CATATCAACACTTACCTTTAATTGGATAACTGGTAACAAATCGTTTTCTAACAATGGAAAAACAACTGTTAGTAATGTCA
TTTATGATACCAAATCTAACACTACCAAGGCTGTTAAAAATGTCAAAAATACAGTTGTATCTGTCATCAATTATCAAAAA
ACAGATAATAGTTATTACAATTATGACAGCGGTTCTCAAGAAAAAAATAAATCAGAAGATGGTCTAGGAGTCTACGGTGA
AGGTTCTGGTGTTATCTACAAAAAAGATGGCGATAGTGCTTATTTAGTCACAAACAATCATGTCGTTAAAGATGCAGAAA
AGTTAGAAATCATGATGGCTAATGGTAAAAAAGTTGTCGGTAAATTAGTAGGTTCTGATACTTATTCTGATCTGGCTGTT
ATTAAAATTTCTTCTAAGTATGTTACGACAGTTGCTGAATTTGCTAATTCGGATAAAATAAAAGTTGGAGAACCAGCAAT
CGCTATTGGTAGCCCTTTAGGCAGTGATTATGCTAATTCTGTAACAGAAGGAATTGTTTCAAGTCTCAGTCGTACAGTAA
CTTCACAAAATGAAAATGGCGAAACAATTTCAACTAATGCTATTCAAACAGACGCAGCTATTAACCCTGGTAATTCTGGT
GGCGCTTTAATTAATATCAAAGGACAAGTTATTGGTATCAATTCAAGTAAAATTGCATCAAGTAATAACTCAAATAGTGG
CGTTGCTGTTGAAGGAATGGGCTTTGCAATTCCTTCAAACGATGTTGTCTCTATTATTAATCAATTAGAAGAAAATGGTG
AAGTTGTTAGACCCGCTCTTGGTATTTCAATGGCTAATCTTAGTGAAGCTTCAACAAGTGGAAGAGATACTTTAAAAATA
CCAAGTGATGTCACAAGCGGTATTGTTGTTCTTTCAACACAAAGTGGTATGCCAGCAGATGGGAAGCTGAAGAAATATGA
TGTCATTACAGAAATTGATGGGAAGAAGGTAGCGTCTATCAGCGATCTTCAAAGTATTCTTTACAAACACAAAAAGGGAG
ATAAAATTAAACTCACTTTCTATCGCGAAAAAGATAAACAAACAGTTGAGATCCAATTAACTAAAACAAGTCAAGATTTG
AATCATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q8DRQ6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

100

100

1

  htrA Streptococcus gordonii str. Challis substr. CH1

56.14

99.254

0.557

  htrA Streptococcus mitis NCTC 12261

54.684

98.259

0.537

  htrA Streptococcus pneumoniae Rx1

54.315

98.01

0.532

  htrA Streptococcus pneumoniae D39

54.315

98.01

0.532

  htrA Streptococcus pneumoniae R6

54.315

98.01

0.532

  htrA Streptococcus pneumoniae TIGR4

54.315

98.01

0.532


Multiple sequence alignment