Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   FSA31_RS00225 Genome accession   NZ_CP044492
Coordinates   32141..32722 (+) Length   193 a.a.
NCBI ID   WP_002276191.1    Uniprot ID   -
Organism   Streptococcus mutans strain T8     
Function   processing and transport of ComC (predicted from homology)   
Competence regulation

Genomic Context

Location: 27141..37722
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FSA31_RS00200 (FSA31_0041) - 27480..28448 (+) 969 WP_002263139.1 ribose-phosphate diphosphokinase -
  FSA31_RS00205 (FSA31_0042) - 28537..29712 (+) 1176 WP_002264118.1 pyridoxal phosphate-dependent aminotransferase -
  FSA31_RS00210 (FSA31_0043) recO 29702..30457 (+) 756 WP_002284527.1 DNA repair protein RecO -
  FSA31_RS00215 (FSA31_0044) plsX 30665..31663 (+) 999 WP_002267554.1 phosphate acyltransferase PlsX -
  FSA31_RS00220 (FSA31_0045) - 31665..31913 (+) 249 WP_002263135.1 acyl carrier protein -
  FSA31_RS00225 (FSA31_0046) comA 32141..32722 (+) 582 WP_002276191.1 ATP-binding cassette domain-containing protein Regulator
  FSA31_RS00230 (FSA31_0047) purC 32844..33551 (+) 708 WP_002274471.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase -
  FSA31_RS00235 (FSA31_0048) - 33561..37286 (+) 3726 WP_002284526.1 phosphoribosylformylglycinamidine synthase -

Sequence

Protein


Download         Length: 193 a.a.        Molecular weight: 21344.31 Da        Isoelectric Point: 4.8856

>NTDB_id=390270 FSA31_RS00225 WP_002276191.1 32141..32722(+) (comA) [Streptococcus mutans strain T8]
MGKSGSGKTTLAKILAGYYTVSSGDSFLDGEKINYSQLRQLVTYVPQQSYVFTGTILDNLLLGAEEEVTDDRLMEVCSIA
EILDNIKAMPLGFQTQISEDGGLSGGQKQRLAIARALLTRQPVLIFDEATSGLDRDTEEKVIANLSKLDRTIIFIAHRGS
VSYYADRIVEIDSGEKIKDRINHRPFSFLMTTL

Nucleotide


Download         Length: 582 bp        

>NTDB_id=390270 FSA31_RS00225 WP_002276191.1 32141..32722(+) (comA) [Streptococcus mutans strain T8]
ATGGGGAAAAGTGGTTCTGGAAAGACAACTTTGGCAAAAATTCTTGCAGGTTATTATACTGTTAGTAGCGGTGACTCTTT
CTTGGATGGAGAAAAGATAAATTATTCCCAGCTGCGCCAATTAGTAACTTATGTGCCACAGCAGTCTTATGTTTTTACAG
GAACAATCTTAGATAATCTGCTTCTTGGTGCTGAAGAGGAAGTAACGGATGATCGCTTAATGGAAGTTTGTTCAATTGCT
GAAATTTTAGACAATATCAAGGCAATGCCTTTAGGTTTTCAAACACAGATTTCAGAAGACGGCGGTTTATCTGGTGGTCA
AAAACAGCGTTTAGCTATTGCACGTGCTCTCTTAACCAGACAGCCTGTGTTGATTTTTGATGAGGCAACTAGTGGTTTAG
ATCGTGATACCGAAGAAAAAGTTATTGCCAATTTATCTAAATTGGATCGCACGATTATTTTTATTGCTCACCGAGGCAGT
GTTTCTTATTATGCTGATCGAATTGTTGAGATTGACTCTGGAGAGAAAATTAAGGACAGAATAAATCATCGTCCTTTCTC
ATTTTTGATGACGACTCTTTGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(1-131)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Streptococcus mitis NCTC 12261

51.337

96.891

0.497
  comA Streptococcus gordonii str. Challis substr. CH1

51.648

94.301

0.487
  comA/nlmT Streptococcus mutans UA159

48.936

97.409

0.477
  comA Streptococcus pneumoniae Rx1

49.727

94.819

0.472
  comA Streptococcus pneumoniae D39

49.727

94.819

0.472
  comA Streptococcus pneumoniae R6

49.727

94.819

0.472
  comA Streptococcus mitis SK321

48.634

94.819

0.461
  comA Streptococcus pneumoniae TIGR4

48.634

94.819

0.461

Multiple sequence alignment