Detailed information NTG0390252

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: FSC11_RS07000
• Genome accession: NZ_CP044483
• Coordinates: 1433784..1434962 (+)
• Length: 392 a.a.
• NCBI ID: WP_163165930.1
• Uniprot ID: -
• Organism: Acinetobacter schindleri strain HZE30-1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1428784..1439962

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FSC11_RS06985 (FSC11_06990)	-	1430120..1431232 (+)	1113	WP_163165924.1	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	-
FSC11_RS06990 (FSC11_06995)	-	1431438..1431968 (+)	531	WP_163165926.1	hypothetical protein	-
FSC11_RS06995 (FSC11_07000)	-	1432490..1433539 (+)	1050	WP_163165928.1	3-deoxy-7-phosphoheptulonate synthase	-
FSC11_RS07000 (FSC11_07005)	pilU	1433784..1434962 (+)	1179	WP_163165930.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
FSC11_RS07005 (FSC11_07010)	pilU	1435374..1436579 (+)	1206	WP_048881092.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
FSC11_RS07010 (FSC11_07015)	-	1436637..1437815 (-)	1179	WP_163165932.1	MFS transporter	-
FSC11_RS07015 (FSC11_07020)	gcvH	1438045..1438419 (-)	375	WP_004809515.1	glycine cleavage system protein GcvH	-
FSC11_RS07020 (FSC11_07025)	-	1438492..1439520 (-)	1029	WP_163165934.1	AraC family transcriptional regulator	-

Sequence

Protein

• Length: 392 a.a.
• Molecular weight: 44511.09 Da
• Isoelectric Point: 6.5062

>NTDB_id=390252 FSC11_RS07000 WP_163165930.1 1433784..1434962(+) (pilU) [Acinetobacter schindleri strain HZE30-1]
MYTPELLDEARKFMHHMLTKVVEYGGSDLFITADFPPSIKQQGLMKPFGQQKLAADKTRLFAYALMNERQIKEFESVMEC
NFGISVPGVSRFRVNVFQQQHNVGMVIRTITTEIPSFQQLGLPNSLQQVIMEKRGLVLIVGATGVGKSTTLAAMIDHRNT
YSEGHIITMEDPVEYVYQHKKSMITQREIGVDCVSWHNALINTMRQAPDVIVIGEIRDTESMEHAIAFAESVHLCLATLH
SNNADQALDRIINFFPEERRNQLLMDLSANMKAVISQRLIRTEDGQGRRAAVEILLNTPLVSDFIRKGDFYELKTIMARS
RELGMQTFDQALFDLYNQGVISYDEALRNADSSNEMRLQIKLKSSRINPALQEEGSKMTILEQSKETTLSRN

Nucleotide

• Length: 1179 bp

>NTDB_id=390252 FSC11_RS07000 WP_163165930.1 1433784..1434962(+) (pilU) [Acinetobacter schindleri strain HZE30-1]
ATGTATACACCCGAATTGCTCGATGAAGCACGTAAATTTATGCACCATATGCTGACCAAAGTGGTTGAATATGGAGGTTC
CGATCTTTTTATTACCGCAGATTTTCCACCAAGTATCAAACAGCAGGGCTTGATGAAACCTTTTGGTCAGCAAAAACTGG
CAGCGGATAAAACCCGTTTGTTTGCCTATGCTTTAATGAATGAACGACAGATCAAGGAATTTGAATCAGTGATGGAATGC
AATTTCGGTATCAGTGTACCGGGTGTATCACGCTTCCGGGTCAATGTCTTTCAGCAACAGCATAATGTTGGGATGGTAAT
CAGAACCATTACTACGGAGATTCCAAGCTTTCAGCAATTAGGACTACCAAACTCTTTGCAACAAGTGATTATGGAAAAAC
GTGGGCTGGTTCTGATTGTAGGTGCGACAGGTGTTGGTAAATCCACCACACTGGCAGCCATGATTGATCACCGCAATACC
TATTCTGAAGGACATATTATTACCATGGAAGATCCGGTGGAATACGTGTATCAACATAAAAAGTCCATGATTACCCAACG
TGAAATTGGCGTAGATTGTGTTTCCTGGCATAACGCGCTGATCAATACCATGCGTCAGGCACCGGATGTGATCGTGATTG
GTGAAATCCGGGATACCGAAAGTATGGAGCATGCGATTGCCTTTGCTGAATCCGTTCATCTGTGTTTGGCCACCCTGCAT
TCTAATAATGCCGATCAGGCTTTAGACCGCATTATTAATTTCTTCCCGGAAGAACGCCGCAATCAGCTGTTAATGGATTT
ATCCGCCAATATGAAAGCTGTGATTTCGCAACGTTTGATCCGTACCGAGGATGGGCAAGGTCGTCGTGCTGCTGTTGAAA
TTTTATTGAATACGCCGCTGGTGTCTGATTTTATCCGTAAAGGAGATTTTTACGAGCTGAAAACTATTATGGCGCGTTCG
CGTGAACTCGGCATGCAGACCTTTGATCAGGCATTATTTGATTTGTACAACCAGGGAGTTATTTCTTATGATGAAGCCTT
GCGTAATGCAGATTCGAGTAATGAAATGCGTTTGCAGATCAAATTAAAGAGCAGTCGCATCAATCCAGCTCTTCAGGAAG
AAGGAAGTAAAATGACGATACTGGAACAATCCAAGGAAACTACACTTTCCAGAAACTGA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (64-282)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	57.759	88.776	0.513
pilU	Acinetobacter baylyi ADP1	54.802	90.306	0.495
pilU	Vibrio cholerae strain A1552	49.577	90.561	0.449
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.478	86.48	0.367