Detailed information NTG0390169

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: FSC10_RS07085
• Genome accession: NZ_CP044463
• Coordinates: 1438607..1439785 (+)
• Length: 392 a.a.
• NCBI ID: WP_163171281.1
• Uniprot ID: A0AAE6WV97
• Organism: Acinetobacter schindleri strain HZE23-1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1433607..1444785

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FSC10_RS07070 (FSC10_07095)	-	1434943..1436055 (+)	1113	WP_004895024.1	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	-
FSC10_RS07075 (FSC10_07100)	-	1436261..1436791 (+)	531	WP_004809525.1	hypothetical protein	-
FSC10_RS07080 (FSC10_07105)	-	1437313..1438362 (+)	1050	WP_004809523.1	3-deoxy-7-phosphoheptulonate synthase	-
FSC10_RS07085 (FSC10_07110)	pilU	1438607..1439785 (+)	1179	WP_163171281.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
FSC10_RS07090 (FSC10_07115)	pilU	1440195..1441400 (+)	1206	WP_163171282.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
FSC10_RS07095 (FSC10_07120)	-	1441458..1442636 (-)	1179	WP_163171283.1	MFS transporter	-
FSC10_RS07100 (FSC10_07125)	gcvH	1442867..1443241 (-)	375	WP_004809515.1	glycine cleavage system protein GcvH	-
FSC10_RS07105 (FSC10_07130)	-	1443314..1444342 (-)	1029	WP_004809513.1	AraC family transcriptional regulator	-

Sequence

Protein

• Length: 392 a.a.
• Molecular weight: 44546.27 Da
• Isoelectric Point: 6.5060

>NTDB_id=390169 FSC10_RS07085 WP_163171281.1 1438607..1439785(+) (pilU) [Acinetobacter schindleri strain HZE23-1]
MYTPELLDEARKFMHHMLTKVVEYGGSDLFITADFPPSIKQQGLMKPFGQQKLAADKTRLFAYALMNERQIKEFESVMEC
NFGISVPGVSRFRVNVFQQQHNVGMVIRTITTEIPSFQQLGLPNSLQQVIMEKRGLVLIVGATGVGKSTTLAAMIDHRNT
YSEGHIITMEDPVEYVYQHKKSMITQREIGVDCVSWHNALINTMRQAPDVIVIGEIRDTDSMEHAIAFAESGHLCLATLH
SNNADQALDRIINFFPEERRNQLLMDLSANMKAVILQRLIRIEDGQGRRAAVEILLNTPLVSDFIRKGDFYELKTIMARS
RELGMQTFDQALFDLYNQGIISYDEALRNADSSNEMRLQIKLKSSRINPALQEEGSRMTILEQSKETILSRI

Nucleotide

• Length: 1179 bp

>NTDB_id=390169 FSC10_RS07085 WP_163171281.1 1438607..1439785(+) (pilU) [Acinetobacter schindleri strain HZE23-1]
ATGTATACACCCGAATTGCTCGATGAAGCACGTAAATTTATGCACCATATGCTGACCAAAGTGGTTGAATATGGAGGTTC
CGATCTTTTTATTACCGCAGATTTTCCACCAAGTATCAAACAGCAGGGCTTGATGAAACCTTTTGGTCAGCAAAAACTGG
CAGCGGATAAAACCCGTTTGTTTGCCTATGCTTTAATGAATGAACGACAGATCAAGGAATTTGAATCAGTGATGGAATGC
AATTTCGGTATCAGTGTACCGGGTGTATCACGCTTCCGGGTCAATGTCTTTCAGCAACAGCATAATGTTGGGATGGTAAT
CAGAACCATTACTACGGAGATTCCAAGCTTTCAGCAATTAGGACTACCAAACTCTTTGCAACAAGTGATTATGGAAAAAC
GTGGGCTGGTTCTGATTGTAGGTGCGACAGGTGTTGGTAAATCCACCACACTGGCAGCCATGATTGATCACCGCAATACC
TATTCTGAAGGACATATTATTACCATGGAAGATCCGGTGGAATACGTGTATCAACATAAAAAGTCCATGATTACCCAACG
TGAAATTGGCGTAGATTGTGTTTCCTGGCATAACGCGCTGATCAACACCATGCGTCAGGCACCGGATGTGATCGTGATCG
GTGAAATTCGTGATACAGACAGTATGGAGCATGCGATTGCCTTTGCTGAATCCGGTCATCTGTGTTTGGCAACCCTGCAT
TCTAATAATGCCGATCAGGCTTTAGACCGAATTATTAATTTCTTCCCGGAAGAACGCCGCAATCAGCTGTTAATGGATTT
ATCCGCCAATATGAAAGCTGTGATTTTGCAACGTTTGATCCGTATCGAGGATGGGCAAGGTCGTCGTGCTGCCGTTGAAA
TTTTATTGAATACGCCGCTGGTGTCTGATTTTATCCGTAAAGGAGATTTTTACGAGCTGAAAACTATTATGGCGCGTTCG
CGTGAACTCGGCATGCAGACCTTTGATCAGGCATTATTTGATTTGTATAACCAGGGAATTATTTCTTATGACGAAGCTTT
GCGTAATGCGGATTCAAGTAATGAAATGCGTTTGCAGATCAAATTAAAAAGCAGTCGCATCAATCCCGCTCTTCAGGAAG
AAGGGAGTAGGATGACGATACTGGAACAATCCAAGGAAACTATACTTTCCAGAATCTGA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (64-281)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	57.471	88.776	0.51
pilU	Acinetobacter baylyi ADP1	53.261	93.878	0.5
pilU	Vibrio cholerae strain A1552	49.577	90.561	0.449
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.478	86.48	0.367